DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32085 and KDM2B

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_011537169.1 Gene:KDM2B / 84678 HGNCID:13610 Length:1353 Species:Homo sapiens


Alignment Length:688 Identity:146/688 - (21%)
Similarity:232/688 - (33%) Gaps:200/688 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RASAELSKRI--NGL--------GLRSKHHHS--------------STSSGAGGAGDAASPAGAT 52
            |.|.|.||::  :||        .||.|..:.              .||.|:........|.|::
Human   779 RRSDEHSKKVPPDGLLRRKSDDVHLRKKRKYEKPQELSGRKRASSLQTSPGSSSHLSPRPPLGSS 843

  Fly    53 PTPAAPSGKTSVMERVTNALCGGGNSNSNSGSNSSNSNTSSASATAATSPASNANPP-------- 109
            .:|...|..|...:::            ..|...........|...|....:.||.|        
Human   844 LSPWWRSSLTYFQQQL------------KPGKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQEP 896

  Fly   110 --QTPDKP--------SRGSSPSPG----GITMPGGQSQVQNSTHHLLQQQQQQQQHMQLQQSQQ 160
              :.|:.|        ||.|||:.|    |...|..:.:|:......|..::..:   :|.:...
Human   897 EDELPEAPPKTRESDHSRSSSPTAGPSTEGAEGPEEKKKVKMRRKRRLPNKELSR---ELSKELN 958

  Fly   161 QHLQLQASTLINSNHHVMVGPAPPTGMPLGAPPTPTVKSIAKQMNITIPGGGVNPGSPTFSTMGM 225
            ..:|...::|.|.|...:.......|.....||                  |:......||    
Human   959 HEIQRTENSLANENQQPIKSEPESEGEEPKRPP------------------GICERPHRFS---- 1001

  Fly   226 VAAQKAAASAGGTPLQLRKQLPNPHLHHPYGSMGINAASPLIM--------QHQLHPPPIH-SIE 281
                   ....|||.:||.|| .|.|..|  ...|:...|.:.        :|.:.||||. ..:
Human  1002 -------KGLNGTPRELRHQL-GPSLRSP--PRVISRPPPSVSPPKCIQMERHVIRPPPISPPPD 1056

  Fly   282 QLMLDD---RFLSR-----FFQYFSPYERRILAQVCIKWRDTLYRSPRYWSGLLPTLQCRELRQM 338
            .|.|||   ..:.|     .|.|.|..:..:..:||..| :......|.|: .:....|:.:..:
Human  1057 SLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTW-NRWCCDKRLWT-RIDLNHCKSITPL 1119

  Fly   339 PGCDRGKLYNSLIRRGFHALGLVGASDEDALDVVHSFPLASKHVHSLSLRCSSISDRGLETLLDH 403
                   :.:.:|||.                     |:      ||.|..::||.:.|..|::.
Human  1120 -------MLSGIIRRQ---------------------PV------SLDLSWTNISKKQLSWLINR 1150

  Fly   404 LQSLFELELAGCNEVTEAGLWACLTPRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQAYHVT 468
            |..|.:|.|:||:.:..:.|.:...|.:.:|.:.....:.|      ||:...|..       .|
Human  1151 LPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKD------AQMRDLLSP-------PT 1202

  Fly   469 DAALGYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAENLQ 533
            |.     .|.|..:.|.||             |||.       |.|:|.. :||..:.||..::.
Human  1203 DN-----RPGQMDNRSKLR-------------NIVE-------LRLAGLD-ITDASLRLIIRHMP 1241

  Fly   534 KLRALDLSWCPRITDASLEYIAC----DLNQLEELTLDRCVHITDIGVGYISTMLSLTALFLRWC 594
            .|..|.||:|..:||.|:..:..    ..:.|.|:.|..|..:||..:.:.....::..:.||:|
Human  1242 LLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNICHIDLRYC 1306

  Fly   595 SQVRDFGL-QHLCSMRNLQV----------LSLAGCPL 621
            .||...|. |.:..|.:.:.          |.|.|.||
Human  1307 KQVTKEGCEQFIAEMSDEESIQKINPSKPGLHLPGSPL 1344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 8/23 (35%)
AMN1 383..600 CDD:187754 56/220 (25%)
leucine-rich repeat 431..456 CDD:275381 4/24 (17%)
leucine-rich repeat 457..482 CDD:275381 5/24 (21%)
leucine-rich repeat 483..508 CDD:275381 6/24 (25%)
leucine-rich repeat 509..534 CDD:275381 7/24 (29%)
leucine-rich repeat 535..560 CDD:275381 8/28 (29%)
leucine-rich repeat 561..585 CDD:275381 6/23 (26%)
leucine-rich repeat 586..610 CDD:275381 8/24 (33%)
leucine-rich repeat 636..661 CDD:275381
KDM2BXP_011537169.1 JmjC 182..257 CDD:214721
cupin_like 229..335 CDD:304367
zf-CXXC <615..651 CDD:251032
PHD_KDM2B 661..722 CDD:277114
F-box-like 1071..1111 CDD:289689 8/41 (20%)
leucine-rich repeat 1105..1129 CDD:275381 5/52 (10%)
AMN1 1121..1310 CDD:187754 59/254 (23%)
leucine-rich repeat 1130..1153 CDD:275381 8/28 (29%)
leucine-rich repeat 1154..1177 CDD:275381 6/22 (27%)
leucine-rich repeat 1178..1217 CDD:275381 12/69 (17%)
leucine-rich repeat 1218..1242 CDD:275381 9/31 (29%)
leucine-rich repeat 1243..1272 CDD:275381 8/28 (29%)
leucine-rich repeat 1273..1297 CDD:275381 6/23 (26%)
leucine-rich repeat 1298..1323 CDD:275381 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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