DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and AT1G55590

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_175955.1 Gene:AT1G55590 / 842008 AraportID:AT1G55590 Length:607 Species:Arabidopsis thaliana


Alignment Length:453 Identity:101/453 - (22%)
Similarity:156/453 - (34%) Gaps:147/453 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 LHPPPIHSIEQLMLDDRFLSRFFQYFSPYERRILAQVCIKWRDTLYRSPRYWSGLLPTLQCRELR 336
            |.|.|..:::.|.|....:|         :|.|:|                .:|.||.|...:|.
plant   213 LSPSPSFTLQSLSLVLDLIS---------DRLIIA----------------ITGSLPQLVKLDLE 252

  Fly   337 QMPGCDRGKLYNSLIRRGFHALGLVGASDEDALDVV---HSFPLASKHVHS-----LSLRCS--- 390
            ..|..:... .|.|...|..|||.  .....:|.:|   ::..::.|.::.     ||..|.   
plant   253 DRPEKEPFP-DNDLTYTGLQALGF--CQQLTSLSLVRTCYNRKISFKRINDMGIFLLSEACKGLE 314

  Fly   391 --------SISDRGLETLLDHLQSLFELELAGC--------NEVT-------EAGLWACLTPRIV 432
                    .:||.|..:||...::|.:.|:.|.        ::||       |..|..|  |.|.
plant   315 SVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTC--PLIT 377

  Fly   433 S--------------LSLADCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSHSL 483
            |              |.|..|.:|:|..:.:|:.|                           ..|
plant   378 SEAVKKLGLCGNLEVLDLGSCKSISDSCLNSVSAL---------------------------RKL 415

  Fly   484 SILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAEN----LQKLRALDLSWCP 544
            :.|.|... ::|:.|::.:..|...:|.|||.||.:::|.|:..:..|    .:.|..|||...|
plant   416 TSLNLAGA-DVTDSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMP 479

  Fly   545 RITDASLEYIACDLNQLEELTLDRCVHITDIGVGYIST-------------------MLSLTALF 590
            .|:|.::..|......|.||::..|.|:||..:..::|                   .:|||...
plant   480 GISDRAIHTITHCCKALTELSIRSCFHVTDSSIESLATWERQAEGGSKQLRKLNVHNCVSLTTGA 544

  Fly   591 LRWCSQVRDFGLQHL------------------CSMRNLQVLSLAGCPLLTSSGLSSLIQLRH 635
            |||.|:....||..|                  |..|....|...||.|..|.|.......||
plant   545 LRWLSKPSFAGLHWLGMGQTRFAGRKETVTAMICGQRPWLTLCFDGCELGCSDGWEFHTPQRH 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 8/39 (21%)
AMN1 383..600 CDD:187754 64/284 (23%)
leucine-rich repeat 431..456 CDD:275381 9/38 (24%)
leucine-rich repeat 457..482 CDD:275381 0/24 (0%)
leucine-rich repeat 483..508 CDD:275381 6/24 (25%)
leucine-rich repeat 509..534 CDD:275381 9/28 (32%)
leucine-rich repeat 535..560 CDD:275381 8/24 (33%)
leucine-rich repeat 561..585 CDD:275381 8/42 (19%)
leucine-rich repeat 586..610 CDD:275381 10/41 (24%)
leucine-rich repeat 636..661 CDD:275381 101/453 (22%)
AT1G55590NP_175955.1 leucine-rich repeat 14..43 CDD:275381
leucine-rich repeat 44..68 CDD:275381
leucine-rich repeat 69..85 CDD:275381
leucine-rich repeat 92..117 CDD:275381
leucine-rich repeat 118..147 CDD:275381
leucine-rich repeat 148..174 CDD:275381
leucine-rich repeat 176..218 CDD:275381 2/4 (50%)
leucine-rich repeat 221..245 CDD:275381 8/48 (17%)
leucine-rich repeat 246..274 CDD:275381 7/28 (25%)
leucine-rich repeat 279..300 CDD:275381 3/20 (15%)
leucine-rich repeat 313..338 CDD:275381 5/24 (21%)
leucine-rich repeat 339..364 CDD:275381 5/24 (21%)
leucine-rich repeat 365..389 CDD:275381 6/25 (24%)
AMN1 386..559 CDD:187754 47/200 (24%)
leucine-rich repeat 390..414 CDD:275381 7/50 (14%)
leucine-rich repeat 415..439 CDD:275381 6/24 (25%)
leucine-rich repeat 440..469 CDD:275381 9/28 (32%)
leucine-rich repeat 470..495 CDD:275381 8/24 (33%)
leucine-rich repeat 496..515 CDD:275381 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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