DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and AT5G21900

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_680178.1 Gene:AT5G21900 / 832250 AraportID:AT5G21900 Length:544 Species:Arabidopsis thaliana


Alignment Length:500 Identity:115/500 - (23%)
Similarity:178/500 - (35%) Gaps:180/500 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 VAAQK--AAASAGGTPLQLRKQLPNPHLHHPYGSMGINAASPLIMQHQLHPPPIHSIEQLMLDDR 288
            |.||.  |..|....|..|||:|       .|...|:......:|             :|:::| 
plant   153 VLAQNFLAIKSLKLVPDHLRKKL-------SYLVSGLGEFDTRLM-------------ELLIED- 196

  Fly   289 FLSRFFQYFSPYERRILAQVCIKW-RDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKL------ 346
                     ||.|  |.|:.|::. .|.|.:           :.|       .|||..|      
plant   197 ---------SPSE--ICAKNCVQLVEDDLVK-----------IFC-------DCDRVSLKVLILD 232

  Fly   347 ----------YNSLIRR---GFHA---LGLVGA---SDEDALDVVHSFPLASKHVHSLSL-RCSS 391
                      .|...:|   ||.:   |.|.||   :|...|.:..|.||    :..::| .||.
plant   233 LCGRSMTDYTINQFFKRAPNGFPSLTTLSLQGAFCLTDNALLLISKSSPL----LQYINLTECSL 293

  Fly   392 ISDRGLETLLDHLQS-LFELELAGCNEVTEAGLWACLTPRIVSLSLADCINIADEAVGAVAQLLP 455
            ::.|.|..|.|...| |..|.:.||..:.:...::                             .
plant   294 LTYRALRILADKFGSTLRGLSIGGCQGIKKHKGFS-----------------------------S 329

  Fly   456 SLYEFSLQAYHVTDAALGYFSPKQSHSLSILRLQSCWELTNHGIVN--IVHSLPHLTVLSLSGCS 518
            |||:|....|                 ||:..|.|    .|.|:|.  .:.....||.|||:.|:
plant   330 SLYKFEKLNY-----------------LSVAGLVS----VNDGVVRSFFMFRSSILTDLSLANCN 373

  Fly   519 KLTDDGVELIAENLQKLRALDLSWCPRITDASLEYIACDLNQLEELTL------DRCV------- 570
            ::||:.:..|....:||.|||::...::||.|||:|......|:.|.|      |.|:       
plant   374 EVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTSNRFSDECIAAFLEVS 438

  Fly   571 ----------HITDIG------VGYISTMLSLTALFLRWCSQVRDFGLQHL---CSMRNLQVLSL 616
                      .:.|:|      :..:..||..  |.|.||.::::..|:.:   ||  :||.|.|
plant   439 GGSLRELCLNKVRDVGPETAFSLAKVCKMLQF--LDLSWCRRLKEDDLRRILRCCS--SLQSLKL 499

  Fly   617 AGCPLLTSSGLSSLIQLR-HLQELELTNCPGASHELFDYLKEHLP 660
            .|...:..:.|..|.:.. |:..|:||:       |:.:|....|
plant   500 FGWTQVEDTYLEELSRSDVHITGLKLTS-------LYAHLDNFYP 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 7/24 (29%)
AMN1 383..600 CDD:187754 57/249 (23%)
leucine-rich repeat 431..456 CDD:275381 0/24 (0%)
leucine-rich repeat 457..482 CDD:275381 4/24 (17%)
leucine-rich repeat 483..508 CDD:275381 7/26 (27%)
leucine-rich repeat 509..534 CDD:275381 9/24 (38%)
leucine-rich repeat 535..560 CDD:275381 10/24 (42%)
leucine-rich repeat 561..585 CDD:275381 8/52 (15%)
leucine-rich repeat 586..610 CDD:275381 7/26 (27%)
leucine-rich repeat 636..661 CDD:275381 5/24 (21%)
AT5G21900NP_680178.1 AMN1 221..405 CDD:187754 57/237 (24%)
leucine-rich repeat 228..244 CDD:275381 0/15 (0%)
leucine-rich repeat 257..282 CDD:275381 7/24 (29%)
leucine-rich repeat 283..309 CDD:275381 7/25 (28%)
leucine-rich repeat 310..354 CDD:275381 15/93 (16%)
AMN1 <357..507 CDD:187754 41/153 (27%)
leucine-rich repeat 364..389 CDD:275381 9/24 (38%)
leucine-rich repeat 390..415 CDD:275381 10/24 (42%)
leucine-rich repeat 416..441 CDD:275381 5/24 (21%)
leucine-rich repeat 442..467 CDD:275381 2/24 (8%)
leucine-rich repeat 468..493 CDD:275381 8/28 (29%)
leucine-rich repeat 494..516 CDD:275381 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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