DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32085 and SLOMO

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_567916.2 Gene:SLOMO / 829457 AraportID:AT4G33210 Length:990 Species:Arabidopsis thaliana


Alignment Length:475 Identity:108/475 - (22%)
Similarity:181/475 - (38%) Gaps:147/475 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 LDDRFLSRFFQYFSPYERRILAQVCIKWRDTLYRSPRYWSGLLPTLQCRELR-----------QM 338
            |.|..|...|.:.:..:....|.||.:|| .......:|.    .|....:|           :.
plant   196 LTDDLLHMVFSFLNHVDLCRSAMVCRQWR-VASAHEDFWR----VLNFENIRISMEQFENMCSRY 255

  Fly   339 PGCDRGKLY-----NSL---------------IRRG------FHALG----LVGASDEDAL---- 369
            |......:|     |:|               |.:|      |.|||    |...:..||:    
plant   256 PNATEVNVYGAPAVNALAMKAATTLRNLEVLTIGKGHISESFFQALGECNMLRSVTVSDAILGNG 320

  Fly   370 --------DVVHSFPLASKHVHSLSLRC----------SSISDRGLETLLDHLQSLFELELAGCN 416
                    |.:....:....|..||:||          |::|...|...|..|     |::|.|:
plant   321 AQEIHLSHDRLRELKITKCRVMRLSIRCPQLRSLSLKRSNMSQAMLNCPLLQL-----LDIASCH 380

  Fly   417 EVTEAGL--WACLTPRIVSLSLADCINIADEAVGAVAQLLPSLY--------EFSLQAYHVTDAA 471
            ::.:|.:  .|...|::.||.:::|..::||.:..:||...:|:        ..||::.|:.   
plant   381 KLLDAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILNASYCPNISLESVHLP--- 442

  Fly   472 LGYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAENLQKLR 536
                      .|::|:|.||..:|:..:..|.:| |.|.||.|..|:.||     .::.:|.:|:
plant   443 ----------MLTVLKLHSCEGITSASMTWIANS-PALEVLELDNCNLLT-----TVSLHLSRLQ 491

  Fly   537 ALDLSWCPRITDASLEYIACDLNQLEELTLDRC-----VHITDIGVGYISTML--SLTALFLRWC 594
            ::.|..|.:.||.:|:.|     .|..:|:..|     :.||...:..::...  :||.|.|: |
plant   492 SISLVHCRKFTDLNLQSI-----MLSSITVSNCPALRRITITSNALRRLALQKQENLTTLVLQ-C 550

  Fly   595 SQVRDFGLQHLCSMRNLQVLSL----AGCPLLTS----------------SGLS--SLIQLRHLQ 637
            ..:::..|....|:.| .|..:    .|||:|.|                |.|:  ||:..|.:.
plant   551 HSLQEVDLSDCESLSN-SVCKIFSDDGGCPMLKSLILDNCESLTAVRFCNSSLASLSLVGCRAVT 614

  Fly   638 ELELTNCP--------GASH 649
            .||| .||        |..|
plant   615 SLEL-KCPRIEQICLDGCDH 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 10/33 (30%)
AMN1 383..600 CDD:187754 60/243 (25%)
leucine-rich repeat 431..456 CDD:275381 7/24 (29%)
leucine-rich repeat 457..482 CDD:275381 4/32 (13%)
leucine-rich repeat 483..508 CDD:275381 8/24 (33%)
leucine-rich repeat 509..534 CDD:275381 8/24 (33%)
leucine-rich repeat 535..560 CDD:275381 7/24 (29%)
leucine-rich repeat 561..585 CDD:275381 5/30 (17%)
leucine-rich repeat 586..610 CDD:275381 7/23 (30%)
leucine-rich repeat 636..661 CDD:275381 7/22 (32%)
SLOMONP_567916.2 F-box-like 195..234 CDD:372399 9/38 (24%)
leucine-rich repeat 208..257 CDD:275381 8/53 (15%)
leucine-rich repeat 258..282 CDD:275381 3/23 (13%)
leucine-rich repeat 283..306 CDD:275381 6/22 (27%)
leucine-rich repeat 307..326 CDD:275381 3/18 (17%)
leucine-rich repeat 331..350 CDD:275381 5/18 (28%)
AMN1 344..523 CDD:187754 53/207 (26%)
leucine-rich repeat 371..396 CDD:275381 6/29 (21%)
leucine-rich repeat 397..422 CDD:275381 7/24 (29%)
leucine-rich repeat 423..443 CDD:275381 4/32 (13%)
leucine-rich repeat 444..468 CDD:275381 8/24 (33%)
leucine-rich repeat 469..489 CDD:275381 8/24 (33%)
leucine-rich repeat 490..521 CDD:275381 10/35 (29%)
AMN1 <516..660 CDD:187754 29/121 (24%)
leucine-rich repeat 522..552 CDD:275381 7/30 (23%)
leucine-rich repeat 602..622 CDD:275381 8/20 (40%)
leucine-rich repeat 623..643 CDD:275381 2/11 (18%)
leucine-rich repeat 644..664 CDD:275381
AMN1 682..>826 CDD:187754
leucine-rich repeat 686..711 CDD:275381
leucine-rich repeat 712..731 CDD:275381
leucine-rich repeat 737..759 CDD:275381
leucine-rich repeat 760..787 CDD:275381
leucine-rich repeat 788..812 CDD:275381
leucine-rich repeat 906..951 CDD:275381
leucine-rich repeat 952..977 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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