DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and AT4G23840

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_194115.3 Gene:AT4G23840 / 828483 AraportID:AT4G23840 Length:597 Species:Arabidopsis thaliana


Alignment Length:501 Identity:117/501 - (23%)
Similarity:172/501 - (34%) Gaps:190/501 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 SPYERRILAQVCIKWRDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKLYNSLIRR--------- 353
            ||..|..|.:.| |..|.:.|    |     .||.|.|..:|    ..|.::|:||         
plant     3 SPLVRLCLKEAC-KSGDAVER----W-----RLQRRSLESLP----PHLADALLRRLLKKRLLFP 53

  Fly   354 ----GF----HALGLVGASDEDA--LDVVHSFPLASKHVHSLSLRCSSISDRGLETL--LDHLQS 406
                ||    ..:.|.|.|..:|  :..:..|      |:.::|..|........||  :..|.|
plant    54 SLLEGFKYSVENIDLRGKSSVNAEWMAYIGGF------VNLITLNLSDCQRINSSTLWPITGLTS 112

  Fly   407 LFELELAGCNEVTEAG------------LW----------ACLTPRIVSLSLADC--INIADEAV 447
            |.||:|:.|.:||:||            ||          ..|...:..|||.|.  :.:.|:.:
plant   113 LTELDLSRCFKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNL 177

  Fly   448 ----------------------GAVAQLLPSLYEFS--------------------LQAYHVTDA 470
                                  |||     |:.:||                    |:..|:...
plant   178 ISLQALTKLEYLDIWGSNVTNQGAV-----SILKFSNLSFLNLSWTSITQTPNIPHLECLHMNTC 237

  Fly   471 ALGYFSPKQSHSLSILRL-------------------QSC--------WELTNHGIVNIVHSLPH 508
            .: ...||...||:.|:.                   :||        ..|.|...:..:.:|.|
plant   238 TI-VSEPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFLETMFNLEH 301

  Fly   509 LTVLSLSGCSKLTDDGVELIA---ENLQKLRALDLSWCPRITDASLEYIACDLNQLEELTLDRCV 570
            |.:.|    :...||.|..:|   |||:.|...|    .:||.:.:..:|..:.|||.|::.: .
plant   302 LDLSS----TAFGDDSVGFVACVGENLKNLNVSD----TQITPSGVGNLAGHVPQLETLSMSQ-T 357

  Fly   571 HITDIGVGYISTMLSLTALFLRWCSQVRDFGLQ------HLCSMRNLQVLSLAGCPLLTS----- 624
            .:.|:.:..|||.:.        |.:..|.|:.      :|.|.:..:..|||....|||     
plant   358 FVDDLSILLISTTMP--------CIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLS 414

  Fly   625 -----------SGLSSLIQLRHLQELELTNCPGASHELFDYLKEHL 659
                       ||||||..|.|   |.||     |..|.|....||
plant   415 LEHPYLGDKALSGLSSLTGLTH---LSLT-----STSLTDSTLHHL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 6/25 (24%)
AMN1 383..600 CDD:187754 65/314 (21%)
leucine-rich repeat 431..456 CDD:275381 8/48 (17%)
leucine-rich repeat 457..482 CDD:275381 6/44 (14%)
leucine-rich repeat 483..508 CDD:275381 7/51 (14%)
leucine-rich repeat 509..534 CDD:275381 9/27 (33%)
leucine-rich repeat 535..560 CDD:275381 5/24 (21%)
leucine-rich repeat 561..585 CDD:275381 7/23 (30%)
leucine-rich repeat 586..610 CDD:275381 5/29 (17%)
leucine-rich repeat 636..661 CDD:275381 8/24 (33%)
AT4G23840NP_194115.3 AMN1 85..>238 CDD:187754 33/163 (20%)
leucine-rich repeat 88..112 CDD:275381 5/23 (22%)
leucine-rich repeat 113..137 CDD:275381 9/23 (39%)
leucine-rich repeat 138..185 CDD:275381 8/46 (17%)
leucine-rich repeat 186..209 CDD:275381 5/27 (19%)
leucine-rich repeat 210..248 CDD:275381 4/38 (11%)
leucine-rich repeat 252..273 CDD:275380 1/20 (5%)
LRR_RI <291..490 CDD:238064 51/187 (27%)
leucine-rich repeat 299..323 CDD:275381 8/27 (30%)
leucine-rich repeat 324..348 CDD:275381 6/27 (22%)
leucine-rich repeat 349..373 CDD:275381 7/32 (22%)
leucine-rich repeat 374..409 CDD:275381 8/34 (24%)
leucine-rich repeat 410..433 CDD:275381 6/22 (27%)
leucine-rich repeat 434..457 CDD:275381 10/27 (37%)
leucine-rich repeat 458..481 CDD:275381
leucine-rich repeat 482..507 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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