DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and AT4G15475

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_567467.1 Gene:AT4G15475 / 827219 AraportID:AT4G15475 Length:610 Species:Arabidopsis thaliana


Alignment Length:498 Identity:124/498 - (24%)
Similarity:202/498 - (40%) Gaps:118/498 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 PYGSMGINAASPLIMQHQLHPPPIHS----IEQLMLDDRFLSRFFQYFSPYERRILAQVCIKWRD 314
            |....|.:::||...:.:......||    :|...|.|..|:.....|...|     .:.:.|  
plant    92 PKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDTGLTALANGFPRIE-----NLSLIW-- 149

  Fly   315 TLYRSPRYWS-GLLPTLQ-CRELR--QMPGCDRGKLYNSLIRRGFHALG-------------LVG 362
                .|...| ||....| |..|:  .:.||..|.       :|..|:|             ..|
plant   150 ----CPNVSSVGLCSLAQKCTSLKSLDLQGCYVGD-------QGLAAVGKFCKQLEELNLRFCEG 203

  Fly   363 ASDEDALDVVHSFPLASKHVHSLSLRCSS-ISDRGLETLLDHLQSLFELELAGCNEVTEAGLWA- 425
            .:|...:|:|..   .||.:.|:.:..|: |:|..||.:..|.: |.|:.......:.:.||.| 
plant   204 LTDVGVIDLVVG---CSKSLKSIGVAASAKITDLSLEAVGSHCK-LLEVLYLDSEYIHDKGLIAV 264

  Fly   426 ---CLTPRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQAY-HVTD---AALGYFSPKQSHSL 483
               |  .|:.:|.| .|:::.|.|..||.:|..||...:|.:: |.||   .|:|    |.|..|
plant   265 AQGC--HRLKNLKL-QCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIG----KGSKKL 322

  Fly   484 SILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAENLQKLRALDLSWCPRITD 548
            ..|.|..|:.::..|:..|.|....|..:.::||..:...|:|.|.::..:|:.|.|.:|.||.:
plant   323 KDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGN 387

  Fly   549 ASLEYIACDLNQLEELTLDRCVHITDIGV------------------------GYIST---MLSL 586
            ::|:.|......||.|.|..|..|.||.:                        |.||.   ..||
plant   388 SALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSL 452

  Fly   587 TALFLRWCSQVRDFGLQHLCSMRNLQVLSLAGCPLLTSSGLSSLI----QLRH------------ 635
            |.|.||:|.:|.:..|..:....:||.|:::||..::.:|::::.    ||.|            
plant   453 TELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDM 517

  Fly   636 -----------LQELELTNCPGASHELFDYLKEHL-PRCLIIE 666
                       |::|.|::|    |.:.|....|| .:|.::|
plant   518 PLAELGEGCPMLKDLVLSHC----HHITDNGLNHLVQKCKLLE 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 7/24 (29%)
AMN1 383..600 CDD:187754 72/252 (29%)
leucine-rich repeat 431..456 CDD:275381 8/24 (33%)
leucine-rich repeat 457..482 CDD:275381 9/28 (32%)
leucine-rich repeat 483..508 CDD:275381 7/24 (29%)
leucine-rich repeat 509..534 CDD:275381 6/24 (25%)
leucine-rich repeat 535..560 CDD:275381 8/24 (33%)
leucine-rich repeat 561..585 CDD:275381 11/50 (22%)
leucine-rich repeat 586..610 CDD:275381 8/23 (35%)
leucine-rich repeat 636..661 CDD:275381 8/25 (32%)
AT4G15475NP_567467.1 FBOX 11..>42 CDD:197608
leucine-rich repeat 142..167 CDD:275381 8/35 (23%)
leucine-rich repeat 168..192 CDD:275381 7/30 (23%)
AMN1 190..359 CDD:187754 48/179 (27%)
leucine-rich repeat 193..218 CDD:275381 4/27 (15%)
leucine-rich repeat 220..245 CDD:275381 7/25 (28%)
leucine-rich repeat 246..263 CDD:275381 3/16 (19%)
leucine-rich repeat 271..295 CDD:275381 8/24 (33%)
leucine-rich repeat 296..321 CDD:275381 9/28 (32%)
leucine-rich repeat 322..347 CDD:275381 7/24 (29%)
AMN1 <345..514 CDD:187754 43/168 (26%)
leucine-rich repeat 348..369 CDD:275381 6/20 (30%)
leucine-rich repeat 374..399 CDD:275381 8/24 (33%)
leucine-rich repeat 400..425 CDD:275381 8/24 (33%)
leucine-rich repeat 426..451 CDD:275381 3/24 (13%)
AMN1 <448..586 CDD:187754 28/113 (25%)
leucine-rich repeat 452..476 CDD:275381 8/23 (35%)
leucine-rich repeat 477..502 CDD:275381 6/24 (25%)
leucine-rich repeat 503..528 CDD:275381 2/24 (8%)
leucine-rich repeat 529..554 CDD:275381 9/28 (32%)
leucine-rich repeat 555..580 CDD:275381 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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