DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and AT2G17020

DIOPT Version :10

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_565400.1 Gene:AT2G17020 / 816205 AraportID:AT2G17020 Length:656 Species:Arabidopsis thaliana


Alignment Length:481 Identity:118/481 - (24%)
Similarity:188/481 - (39%) Gaps:103/481 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 PNPHLHHPYGSMGINAASPLIMQHQLHPPPIHSIEQLMLDDRFL--SRFFQYFSPYERRILAQVC 309
            ||.|:.:.  |:.:....||:..:|       .:..|.||...|  |.......|..|.|....|
plant    65 PNFHIFNV--SLSMETVRPLLFPNQ-------QLSSLKLDCGRLGNSAIDILVRPSLREISLHNC 120

  Fly   310 IKWRDTLYRSPRYWSG-LLPTL--QCRELRQM-PGCDRGKLYNSLIRRGFHALGLVGASDEDALD 370
                       |.:|| |:..:  :|::||.: .|....|:..|:.|.....| |.|.|..:.|.
plant   121 -----------RDFSGDLISEIGRKCKDLRLLCLGSVAEKVGRSISRCALEDL-LNGCSHLEVLA 173

  Fly   371 VVHSFPLASKHVHSLSLRCSS------ISDRGLETLLDHL------QSLFELELAG--CNEVTEA 421
            ::  |.|      ||.||...      :|||.....|.|:      |.|...|::|  .|.||. 
plant   174 LM--FDL------SLYLRPGDGRIFGLVSDRLTHLELGHITSRMMTQLLTSTEISGQDSNRVTT- 229

  Fly   422 GLWACLTPRIVSLSLA-DCINIADEAVGAVAQLLPSLYEFSL---------QAYHVTDAALGYFS 476
               :.:...:..|.|: ||  |.|..|.|:::.||||.:..:         |...:||..|...:
plant   230 ---STVLQNVQRLRLSVDC--ITDAVVKAISKSLPSLIDLDIRDAPLEDPRQVSDLTDFGLHEIN 289

  Fly   477 P--KQSHSLSILRLQSCW-----ELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAENLQK 534
            .  |..| ||::|.|...     .:::.|::.:......:..:.|.|..::||.|.:.|..:...
plant   290 QNGKLKH-LSLIRSQEFHPTYFRRVSDQGMLFLADKCLGMETICLGGFCRVTDAGFKTILHSCAS 353

  Fly   535 LRALDLSWCPRITDASLEYIACDLNQLEELTLDRCVHITDIGVGYISTMLSLTALFLRWCSQVRD 599
            |....:...|::||.....|......|..::|.||..:||..:..:::.|.|..|.||.|..:||
plant   354 LSKFSIYHGPKLTDLVFHDILATTLSLSHVSLRRCHLLTDHAIQKLASSLKLENLDLRGCRNLRD 418

  Fly   600 FGLQHLCSMRNLQV--------------------------LSLAGCPLLTSSGLSSLI---QLRH 635
            ..|..:..:..|:|                          ||:.||..||...:|:|.   ....
plant   419 ETLTAVSHLPKLKVLLLDGADISDTGLSYLKEGVLDSLVSLSVRGCRNLTDKFMSTLFDGSSKLA 483

  Fly   636 LQELELTNCPGASH-ELFDYLKEHLP 660
            |:||:|:|.|..:. .:|...|...|
plant   484 LRELDLSNLPNLTDAAIFALAKSGAP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 10/43 (23%)
leucine-rich repeat 382..406 CDD:275381 9/35 (26%)
AMN1 383..600 CDD:187754 63/247 (26%)
leucine-rich repeat 431..456 CDD:275381 9/25 (36%)
leucine-rich repeat 457..482 CDD:275381 6/35 (17%)
leucine-rich repeat 483..508 CDD:275381 5/29 (17%)
leucine-rich repeat 509..534 CDD:275381 6/24 (25%)
leucine-rich repeat 535..560 CDD:275381 5/24 (21%)
leucine-rich repeat 561..585 CDD:275381 6/23 (26%)
leucine-rich repeat 586..610 CDD:275381 8/23 (35%)
leucine-rich repeat 636..661 CDD:275381 9/26 (35%)
AT2G17020NP_565400.1 F-box_FBXL4 23..70 CDD:438889 3/4 (75%)
leucine-rich repeat 53..87 CDD:275381 6/23 (26%)
leucine-rich repeat 89..111 CDD:275381 5/21 (24%)
leucine-rich repeat 112..137 CDD:275381 8/35 (23%)
leucine-rich repeat 138..168 CDD:275381 9/30 (30%)
leucine-rich repeat 169..215 CDD:275381 13/53 (25%)
leucine-rich repeat 236..260 CDD:275381 9/25 (36%)
AMN1 <246..394 CDD:187754 35/148 (24%)
leucine-rich repeat 261..292 CDD:275381 5/30 (17%)
leucine-rich repeat 294..315 CDD:275381 5/21 (24%)
leucine-rich repeat 328..353 CDD:275381 6/24 (25%)
AMN1 337..497 CDD:187754 40/159 (25%)
leucine-rich repeat 354..379 CDD:275381 5/24 (21%)
leucine-rich repeat 380..404 CDD:275381 6/23 (26%)
leucine-rich repeat 405..429 CDD:275381 8/23 (35%)
leucine-rich repeat 430..455 CDD:275381 2/24 (8%)
leucine-rich repeat 456..481 CDD:275381 8/24 (33%)
leucine-rich repeat 482..509 CDD:275381 8/26 (31%)
leucine-rich repeat 510..529 CDD:275381 118/481 (25%)

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