DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32085 and AT2G06040

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_178661.2 Gene:AT2G06040 / 815159 AraportID:AT2G06040 Length:762 Species:Arabidopsis thaliana


Alignment Length:320 Identity:80/320 - (25%)
Similarity:130/320 - (40%) Gaps:71/320 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 TLYRSPRYWSGLLPTLQCRELRQMPGCDRGKLYNSLIRRGFHALGLVGA---SDEDALDVVHSFP 376
            ||.|||:    :||.|.                         .|.:.||   ||.....:|.|.|
plant   474 TLARSPK----VLPMLS-------------------------TLSISGACRLSDVGLRQLVSSAP 509

  Fly   377 LASKHVHSLSL-RCSSISDRGLETLLDHLQS-LFELELAGCNEVTEAGLWACLT--PRIVSLSLA 437
            .    :.|::| :||.::...::.|.|.|.| |.||.:..|..:....:.|.|.  .::..||||
plant   510 A----ITSINLNQCSLLTSSSIDMLSDSLGSVLRELYINECQNIDMKHILAALKKFEKLEVLSLA 570

  Fly   438 DCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSHSLSILRLQSCWELTNHGIVNI 502
            |               |||          |....|..|...:..:|..|.|.:..:|::..|..|
plant   571 D---------------LPS----------VKGRFLKEFVTARGQTLKQLILTNSRKLSDSSIKVI 610

  Fly   503 VHSLPHLTVLSLSGCSKLTDDGVELIAENLQKLRALDLSWCPRITDASLEYIACDLNQLEELTLD 567
            ..:.|:|:||.|:...||||..:..:|...|.|..|.....|...:|...::......|:||:|:
plant   611 SENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKLIFCRNPFSDEAVAAFVETAGGSLKELSLN 675

  Fly   568 ---RCVHITDIGVGYISTMLSLTALFLRWCSQVRDFGLQHLC-SMRNLQVLSLAGCPLLT 623
               :..|.|.:.:...|..|.:  |.:.||.::.:..|.::. :..:|:||.:.||..:|
plant   676 NVKKVGHNTALALAKHSDKLQI--LDISWCREMSNDLLGYIVDNSSSLKVLKVFGCSQVT 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 7/24 (29%)
AMN1 383..600 CDD:187754 57/223 (26%)
leucine-rich repeat 431..456 CDD:275381 6/24 (25%)
leucine-rich repeat 457..482 CDD:275381 3/24 (13%)
leucine-rich repeat 483..508 CDD:275381 6/24 (25%)
leucine-rich repeat 509..534 CDD:275381 9/24 (38%)
leucine-rich repeat 535..560 CDD:275381 4/24 (17%)
leucine-rich repeat 561..585 CDD:275381 7/26 (27%)
leucine-rich repeat 586..610 CDD:275381 4/24 (17%)
leucine-rich repeat 636..661 CDD:275381
AT2G06040NP_178661.2 leucine-rich repeat 427..453 CDD:275381
AMN1 446..632 CDD:187754 56/215 (26%)
leucine-rich repeat 454..484 CDD:275381 6/13 (46%)
leucine-rich repeat 485..510 CDD:275381 8/49 (16%)
leucine-rich repeat 511..527 CDD:275381 4/15 (27%)
leucine-rich repeat 538..563 CDD:275381 6/24 (25%)
leucine-rich repeat 564..590 CDD:275381 11/50 (22%)
leucine-rich repeat 591..616 CDD:275381 6/24 (25%)
leucine-rich repeat 617..642 CDD:275381 9/24 (38%)
leucine-rich repeat 643..668 CDD:275381 4/24 (17%)
leucine-rich repeat 669..694 CDD:275381 7/24 (29%)
leucine-rich repeat 695..720 CDD:275381 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.