DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32085 and fbxl16

DIOPT Version :10

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001188265.1 Gene:fbxl16 / 797939 ZFINID:ZDB-GENE-120215-180 Length:493 Species:Danio rerio


Alignment Length:488 Identity:253/488 - (51%)
Similarity:327/488 - (67%) Gaps:61/488 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 PPTGMPLGAPPTPTVKSIAKQMNITIPGGGVNPGSPTFSTMGMVAAQKAAASAGGTPLQLRKQLP 247
            ||..:|....|.||..|:......|.|...:.|                       ||   :|.|
Zfish    63 PPPSLPYHLDPLPTAASLLGPDLDTSPVTAIKP-----------------------PL---RQFP 101

  Fly   248 NPHLHHPYGSMGINAASPLIMQHQLHPPPIHSIEQLMLDDRFLSRFFQYFSPYERRILAQVCIKW 312
            .|.|.                            .||:||::.|:|...||:..|:.||||||..|
Zfish   102 KPLLE----------------------------RQLILDEKVLNRLLWYFTTAEKCILAQVCKTW 138

  Fly   313 RDTLYRSPRYWSGLLPTLQCRELRQ-MPGCDRGKLYNSL---IRRGFHALGLVGASDEDALDVVH 373
            |..||: |::|.|:.|.|..:||.. :|..:  |.:.||   ..|||.|..|||.||.|..:.:.
Zfish   139 RKVLYQ-PKFWEGVTPILHAKELYTILPNGE--KEFVSLQAFALRGFQAFCLVGVSDLDICEFID 200

  Fly   374 SFPLASKHVHSLSLRCSSISDRGLETLLDHLQSLFELELAGCNEVTEAGLWACLTPRIVSLSLAD 438
            ::||:.|.|.|:||:.|:|:|.|||.:|:.:|.|..|||:|||:.||||||:.|..|:.|||::|
Zfish   201 NYPLSKKGVKSVSLKRSTITDAGLEVMLEQMQGLMHLELSGCNDFTEAGLWSSLNARLTSLSVSD 265

  Fly   439 CINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSHSLSILRLQSCWELTNHGIVNIV 503
            |||:||:|:.|::||||:|.|.|||||||||.|:.||:.||.::...|||.||||:||||:||:|
Zfish   266 CINVADDAIAAISQLLPNLSELSLQAYHVTDTAMAYFTAKQGYTTHTLRLNSCWEITNHGVVNMV 330

  Fly   504 HSLPHLTVLSLSGCSKLTDDGVELIAENLQKLRALDLSWCPRITDASLEYIACDLNQLEELTLDR 568
            ||||:||.||||||||:|||||||:||||:|||:|||||||||||.:||||||||::||||.|||
Zfish   331 HSLPNLTSLSLSGCSKITDDGVELVAENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDR 395

  Fly   569 CVHITDIGVGYISTMLSLTALFLRWCSQVRDFGLQHLCSMRNLQVLSLAGCPLLTSSGLSSLIQL 633
            ||.|||.|:||:|||.:|.:|:||||.||:|||||||..||:|::||||||||||::|||.||||
Zfish   396 CVRITDTGLGYLSTMSTLRSLYLRWCCQVQDFGLQHLYGMRSLRLLSLAGCPLLTTTGLSGLIQL 460

  Fly   634 RHLQELELTNCPGASHELFDYLKEHLPRCLIIE 666
            :.|:||||||||||:.|||.|..:|||||::||
Zfish   461 QDLEELELTNCPGATAELFKYYSQHLPRCMVIE 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 20/41 (49%)
leucine-rich repeat 382..406 CDD:275381 11/23 (48%)
AMN1 383..600 CDD:187754 144/216 (67%)
leucine-rich repeat 431..456 CDD:275381 14/24 (58%)
leucine-rich repeat 457..482 CDD:275381 16/24 (67%)
leucine-rich repeat 483..508 CDD:275381 17/24 (71%)
leucine-rich repeat 509..534 CDD:275381 21/24 (88%)
leucine-rich repeat 535..560 CDD:275381 21/24 (88%)
leucine-rich repeat 561..585 CDD:275381 18/23 (78%)
leucine-rich repeat 586..610 CDD:275381 16/23 (70%)
leucine-rich repeat 636..661 CDD:275381 17/24 (71%)
fbxl16NP_001188265.1 F-box_FBXL16 109..150 CDD:438899 20/41 (49%)
leucine-rich repeat 209..233 CDD:275381 11/23 (48%)
AMN1 215..446 CDD:187754 155/230 (67%)
leucine-rich repeat 234..253 CDD:275381 13/18 (72%)
leucine-rich repeat 258..283 CDD:275381 14/24 (58%)
leucine-rich repeat 284..308 CDD:275381 16/23 (70%)
leucine-rich repeat 309..335 CDD:275381 17/25 (68%)
leucine-rich repeat 336..361 CDD:275381 21/24 (88%)
leucine-rich repeat 362..387 CDD:275381 21/24 (88%)
leucine-rich repeat 388..412 CDD:275381 18/23 (78%)
leucine-rich repeat 413..437 CDD:275381 16/23 (70%)
leucine-rich repeat 438..457 CDD:275381 14/18 (78%)
leucine-rich repeat 463..488 CDD:275381 17/24 (71%)

Return to query results.
Submit another query.