DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and amn1

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001038919.1 Gene:amn1 / 751744 ZFINID:ZDB-GENE-060825-13 Length:249 Species:Danio rerio


Alignment Length:257 Identity:67/257 - (26%)
Similarity:121/257 - (47%) Gaps:28/257 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 LDHLQSLFELELAGCNEVTEAGLWACLTPRIVSLSLADCINIADEAVGAV-----AQLLPS-LYE 459
            :|.|.||....:|...|..|       ..|::..|:.|.:.....:.|.|     :||:.| .:.
Zfish     4 IDSLMSLCAFSVAQRAEKYE-------DIRMLPASVKDRLLRIMTSYGTVTDSNISQLVHSGTHT 61

  Fly   460 FSLQAYHVTDAALGYFSPKQSHSLSI--LRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTD 522
            ..||...::|:||     ||.:||.:  :.|:.|.|:|:.|:..:....|:|.|:.|:||:.:||
Zfish    62 LDLQNCKISDSAL-----KQINSLHLRTILLRGCAEITSEGLEVLAPRCPYLQVVDLTGCTAVTD 121

  Fly   523 DGVELIAENLQKLRALDLSWCPRITDASLEYIACDLNQLEELTLDRCVHITDIGVGYIST---ML 584
            .|::.:|.:.:.|..:.|..|..::|.:|..:..:...|..:.... ..:||.||..::|   ..
Zfish   122 SGIQALARHCKCLEVISLRGCSALSDKALLELGGNCKMLHSIYFSG-TEVTDQGVIGLATGVCSC 185

  Fly   585 SLTALFLRWCSQVRDFGLQH-LCSMRNLQVLSLAGCPLLTS---SGLSSLIQLRHLQELELT 642
            ||..|.:..|..:.|..:.. |.:..|:::.:..||||:|.   ..|.:||....:|::..|
Zfish   186 SLKELQMVRCRNLTDLAVTAVLTNCANIRIFNFHGCPLITDKSREALQNLIGPNKIQQVSWT 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 2/4 (50%)
AMN1 383..600 CDD:187754 54/209 (26%)
leucine-rich repeat 431..456 CDD:275381 6/29 (21%)
leucine-rich repeat 457..482 CDD:275381 7/24 (29%)
leucine-rich repeat 483..508 CDD:275381 6/26 (23%)
leucine-rich repeat 509..534 CDD:275381 9/24 (38%)
leucine-rich repeat 535..560 CDD:275381 5/24 (21%)
leucine-rich repeat 561..585 CDD:275381 6/26 (23%)
leucine-rich repeat 586..610 CDD:275381 5/24 (21%)
leucine-rich repeat 636..661 CDD:275381 2/7 (29%)
amn1NP_001038919.1 AMN1 33..248 CDD:187754 58/221 (26%)
leucine-rich repeat 59..72 CDD:275381 2/12 (17%)
leucine-rich repeat 82..107 CDD:275381 5/24 (21%)
leucine-rich repeat 108..133 CDD:275381 9/24 (38%)
leucine-rich repeat 134..159 CDD:275381 5/24 (21%)
leucine-rich repeat 160..186 CDD:275381 6/26 (23%)
leucine-rich repeat 187..212 CDD:275381 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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