DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32085 and Fbxl17

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_056609.1 Gene:Fbxl17 / 50758 MGIID:1354704 Length:701 Species:Mus musculus


Alignment Length:704 Identity:143/704 - (20%)
Similarity:235/704 - (33%) Gaps:196/704 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AGATPTPAAPSGKTSVMERVTNALCGGGNSNSNSGSNSSNSNTSSASATAATSPASNANPPQTPD 113
            |.|:|.||||..:.... |....||                 ....|..|..|......||.:|.
Mouse    39 AKASPQPAAPRSRDCFF-RGPCMLC-----------------FIVHSPGAPASAGLEEEPPLSPP 85

  Fly   114 KPSRGSSPSPGGITMPGGQSQVQN------------STHHLLQQQQQQQQHMQLQQSQQQHLQLQ 166
            .|    .|..|.......|...:.            :...||..............|..:.|.|.
Mouse    86 PP----PPRDGAYAAVSSQHLARRYAALAAEDCAAAARRFLLSSAAAAAAAASSPASCCKELGLA 146

  Fly   167 ASTLINSNHHVM----VGP--------------APPTGMPLGAPPTPTVKSIAKQMNITIP---- 209
            |:.........:    |||              |||...|...|.| .::.:.|:....:|    
Mouse   147 AAAAWEQQGRSLFLAGVGPVRFLGPLAAVQLFRAPPAPPPQAEPAT-ALEMVCKRKGAGVPACTP 210

  Fly   210 ----------------------GGGVN-----------------------PGSPTFSTMGMVAAQ 229
                                  |||.:                       |.||......:|||.
Mouse   211 CKQPRCGCGGCGGGGGGGGGPAGGGASPPRPPDAGCCQAPEQPPPPLCPAPASPASECAPIVAAA 275

  Fly   230 KAAASAGGTPLQLRKQLP------------NPHLHHPYGSMGINAASPLIMQHQLHPPPIHSIEQ 282
            .....||||.....:|.|            ||                 ...|:..||.|..|.|
Mouse   276 GDTVRAGGTAPSSAQQQPESGDADCQEPPENP-----------------CDCHREPPPEIPDINQ 323

  Fly   283 LMLDDRFLSRFFQYFSPYERRILAQ-VCIKWRDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKL 346
              |....|.:.|...|..||.:.|. ||..||| |....::|            :|:....|.::
Mouse   324 --LPPSILLKIFSNLSLNERCLSASLVCKYWRD-LCLDFQFW------------KQLDLSSRQQV 373

  Fly   347 YNSLIRRGFHALGLVGASDEDALDVVHSFPLASKHVHSLS-------------------LRCSSI 392
            .:.|:.:       :.:..::.:::..|      ...|||                   .||..:
Mouse   374 TDELLEK-------IASRSQNIIEINIS------DCRSLSDSGVCVLAFKCPGLLRYTAYRCKQL 425

  Fly   393 SDRGLETLLDHLQSLFELELAGCNEVTEAGL--WACLTPRIVSLSLADCINIADEAVGAVAQLLP 455
            ||..:..:..|...|.::.:...:::|:.||  .......:..:....|..|:||.:..:|:...
Mouse   426 SDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSRCRELKDIHFGQCYKISDEGMIVIAKSCL 490

  Fly   456 SLYEFSLQAYH-VTDAALGYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSK 519
            .|....:|... |||.::..|: :....|..:....| .:|:.|::::. .|.:|:.|.|...::
Mouse   491 KLQRIYMQENKLVTDQSVKAFA-EHCPELQYVGFMGC-SVTSKGVIHLT-KLRNLSSLDLRHITE 552

  Fly   520 LTDDGVELIAENLQKLRALD--LSWCPRITDASLEYIACDLNQLEELTLDRCVHITD---IGVGY 579
            |.::.|..|.:..:.|.:|:  |:|.  |.|..:|.||.:...|:||.|..| .|||   |.:|.
Mouse   553 LDNETVMEIVKRCKNLSSLNLCLNWI--INDRCVEVIAKEGQNLKELYLVSC-KITDYALIAIGR 614

  Fly   580 ISTMLSLTALFLRWCSQVRDFGLQHLC-SMRNLQVLSLAGCPLLTSSGLSSLIQ 632
            .|  :::..:.:.||.::.|.|...:. |.::|:.|.|..|..:....:..|:|
Mouse   615 YS--VTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNELTVEQLVQ 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 8/42 (19%)
AMN1 383..600 CDD:187754 56/243 (23%)
leucine-rich repeat 431..456 CDD:275381 5/24 (21%)
leucine-rich repeat 457..482 CDD:275381 6/25 (24%)
leucine-rich repeat 483..508 CDD:275381 5/24 (21%)
leucine-rich repeat 509..534 CDD:275381 6/24 (25%)
leucine-rich repeat 535..560 CDD:275381 9/26 (35%)
leucine-rich repeat 561..585 CDD:275381 11/26 (42%)
leucine-rich repeat 586..610 CDD:275381 5/24 (21%)
leucine-rich repeat 636..661 CDD:275381
Fbxl17NP_056609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..250 3/22 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..321 12/58 (21%)
F-box-like 321..368 CDD:289689 17/61 (28%)
leucine-rich repeat 362..387 CDD:275381 4/43 (9%)
leucine-rich repeat 388..413 CDD:275381 4/30 (13%)
AMN1 411..573 CDD:187754 33/164 (20%)
leucine-rich repeat 414..439 CDD:275381 5/24 (21%)
leucine-rich repeat 440..465 CDD:275381 4/24 (17%)
leucine-rich repeat 466..491 CDD:275381 5/24 (21%)
leucine-rich repeat 492..517 CDD:275381 6/25 (24%)
leucine-rich repeat 545..567 CDD:275381 5/21 (24%)
leucine-rich repeat 568..593 CDD:275381 9/26 (35%)
leucine-rich repeat 594..618 CDD:275381 11/26 (42%)
leucine-rich repeat 619..644 CDD:275381 5/24 (21%)
leucine-rich repeat 645..670 CDD:275381 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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