DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and fbxl4

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001007316.1 Gene:fbxl4 / 492349 ZFINID:ZDB-GENE-041114-187 Length:607 Species:Danio rerio


Alignment Length:307 Identity:79/307 - (25%)
Similarity:128/307 - (41%) Gaps:61/307 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 SLFELELAGCN-------EVTEAGLWACLTPRIVSLSLADCI--NIADEAVGAVAQLLP------ 455
            :|:::.:...|       |::|||...|.:......|||:..  .:..|.:..:...||      
Zfish   224 ALYKIPVIDINDLSDSEEEISEAGGLCCRSTAENRQSLANGYFDRLPYELIQLIVSHLPVPDLCR 288

  Fly   456 ----------------SLYEFSLQAY--HVTDAALGYFSPKQSHSLSILRLQSCW-----ELTNH 497
                            ...:.|||.|  .:|||:|.:.   ||....:.||...|     .:|..
Zfish   289 LAQSCKLFHKHCCDPLQYIQLSLQPYWARLTDASLCHL---QSRCTLLQRLNLSWTGNRGAVTPA 350

  Fly   498 GIVNIVHSL-PHLTVLSLSGCSKLTDDGVELIAENLQKLRALDLSWCPRITDASLEYIACDLNQL 561
            |..:.:.:. ..|..|.:|.|..||:..:|:|.:....|:.|:|:.|.|:...:..:|| .|..|
Zfish   351 GFCSFMKACGASLVCLEVSCCHFLTEACLEVITQTCPCLQELNLASCDRLQPQAFNHIA-KLTHL 414

  Fly   562 EELTLDRCVHITDIGVGYISTMLS----LTALFLRWCSQVRDFGLQHLCSM-----RNLQVLSLA 617
            ..|.|.|    |.:....|.::|:    |..|.|..|..:.|:.:  :.||     |:|:.|.|.
Zfish   415 RRLVLYR----TKVEQSAILSILTFCPELRHLNLGSCVMIEDYDV--VVSMLSARCRSLRSLDLW 473

  Fly   618 GCPLLTSSGLSSLIQ-LRHLQELELTNCP--GASHELFDYLKEHLPR 661
            .|..|:..||:.|:. .|.|:||:|..|.  .:|...|.:|...|||
Zfish   474 RCRNLSERGLAELVSGCRLLEELDLGWCSTLQSSSACFQHLARSLPR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 79/307 (26%)
AMN1 383..600 CDD:187754 55/236 (23%)
leucine-rich repeat 431..456 CDD:275381 6/48 (13%)
leucine-rich repeat 457..482 CDD:275381 10/26 (38%)
leucine-rich repeat 483..508 CDD:275381 5/30 (17%)
leucine-rich repeat 509..534 CDD:275381 8/24 (33%)
leucine-rich repeat 535..560 CDD:275381 8/24 (33%)
leucine-rich repeat 561..585 CDD:275381 6/23 (26%)
leucine-rich repeat 586..610 CDD:275381 7/28 (25%)
leucine-rich repeat 636..661 CDD:275381 9/26 (35%)
fbxl4NP_001007316.1 F-box-like 266..312 CDD:289689 4/45 (9%)
leucine-rich repeat 281..303 CDD:275381 2/21 (10%)
leucine-rich repeat 304..326 CDD:275381 8/21 (38%)
AMN1 <317..436 CDD:187754 34/126 (27%)
leucine-rich repeat 333..362 CDD:275381 5/28 (18%)
leucine-rich repeat 363..388 CDD:275381 8/24 (33%)
leucine-rich repeat 389..413 CDD:275381 8/24 (33%)
AMN1 414..591 CDD:187754 35/113 (31%)
leucine-rich repeat 414..438 CDD:275381 7/27 (26%)
leucine-rich repeat 439..466 CDD:275381 7/28 (25%)
leucine-rich repeat 467..492 CDD:275381 8/24 (33%)
leucine-rich repeat 493..520 CDD:275381 9/26 (35%)
leucine-rich repeat 521..545 CDD:275381 79/307 (26%)
leucine-rich repeat 547..572 CDD:275381
leucine-rich repeat 573..598 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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