DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and Ppa

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster


Alignment Length:629 Identity:167/629 - (26%)
Similarity:262/629 - (41%) Gaps:136/629 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ATPTPAAP-SGKTSVMERVTNALCGGGNSNSNSGSNSSNSNTSSASATAATSPASNANPPQTPDK 114
            ||.|...| ..:|..:....|:.|||  |.||..:.|..:....|.|..|.|.|.:....|| :.
  Fly     2 ATNTELLPFHHQTIAVLNNLNSHCGG--SGSNGAATSGGAAIGGAGAGGAPSWAMDELYQQT-EL 63

  Fly   115 PSRGSSPSPGGITMPGGQSQVQNSTHHLLQQQQQQQQHMQLQQSQQQHLQLQASTLINSNHHVMV 179
            |         |:|..|..:    :.||||:.......|      :..|.|||  ||         
  Fly    64 P---------GLTRTGATT----THHHLLRFTPYALHH------RPPHHQLQ--TL--------- 98

  Fly   180 GPAPPTGMPLGAPPTPTVKSIAKQMNITIPGGGVNPGSPTFSTMGMVAAQKAAASAGGTPLQLRK 244
                        ||...::.                          .||..|||:|.....|   
  Fly    99 ------------PPALYLQH--------------------------AAAAAAAAAAAAAHAQ--- 122

  Fly   245 QLPNPHLHHPYGSMGINAASPLIMQHQLHPPPIHSIEQLMLDDRFLSRFFQYFSPYERRILAQVC 309
                 |.||.:..:....|||      ..|||:.......|....|.:.|::....:....||||
  Fly   123 -----HHHHHHHHLPHRPASP------ESPPPVEGTHISNLFPELLEQIFEHLPVRDLGRAAQVC 176

  Fly   310 IKWRDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKLYNSLIRRGFH------------------ 356
            ..|||..| :...|.|:...|..:  |..|     .|:|.|::||..                  
  Fly   177 TAWRDAAY-AKSVWKGVEAKLHLK--RSSP-----SLFNCLVKRGIKKVQILSLRRSLKDLVLGV 233

  Fly   357 ----ALGLVGASDEDALDVVHSFPLASKHVHSLSLR-CSSISDRGLETLLDHLQSLFELELAGCN 416
                :|.|.|..:...:::.|:|.:...::.:|.|. |..|:|..|..:..||::|..|||.||.
  Fly   234 PALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCC 298

  Fly   417 EVTEAGL----WACLTPRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQ--------AYHVTD 469
            .:|..||    |.  ..::..|:|..|.:|:|:.:|.:|.......|.:||        ...::|
  Fly   299 NITNTGLLLIAWG--LKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSD 361

  Fly   470 AALGYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAENLQK 534
            .|||:.:...: ||..:.|..|..:|:.|:.::.. :|.|..|:|..|..::|.|:..:.|....
  Fly   362 EALGHIAQGLT-SLKSINLSFCVSVTDSGLKHLAR-MPKLEQLNLRSCDNISDIGMAYLTEGGSG 424

  Fly   535 LRALDLSWCPRITDASLEYIACDLNQLEELTLDRCVHITDIGVGYISTML-SLTALFLRWCSQVR 598
            :.:||:|:|.:|:|.:|.:||..|.:|..|:|::| .|||.|:..|:..| .|..|.:..||::.
  Fly   425 INSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQC-QITDHGMLKIAKALHELENLNIGQCSRIT 488

  Fly   599 DFGLQHLC-SMRNLQVLSLAGCPLLTSSGLSSLIQLRHLQELEL 641
            |.|||.|. .:.||:.:.|.||..|:|.|:..:::|..||:|.|
  Fly   489 DKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNL 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 8/24 (33%)
AMN1 383..600 CDD:187754 70/230 (30%)
leucine-rich repeat 431..456 CDD:275381 7/24 (29%)
leucine-rich repeat 457..482 CDD:275381 7/32 (22%)
leucine-rich repeat 483..508 CDD:275381 5/24 (21%)
leucine-rich repeat 509..534 CDD:275381 7/24 (29%)
leucine-rich repeat 535..560 CDD:275381 10/24 (42%)
leucine-rich repeat 561..585 CDD:275381 10/24 (42%)
leucine-rich repeat 586..610 CDD:275381 9/24 (38%)
leucine-rich repeat 636..661 CDD:275381 4/6 (67%)
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 11/41 (27%)
AMN1 <226..>334 CDD:187754 29/109 (27%)
leucine-rich repeat 236..256 CDD:275381 4/19 (21%)
leucine-rich repeat 263..288 CDD:275381 8/24 (33%)
leucine-rich repeat 289..314 CDD:275381 10/26 (38%)
leucine-rich repeat 315..347 CDD:275381 8/31 (26%)
AMN1 347..524 CDD:187754 56/179 (31%)
leucine-rich repeat 348..373 CDD:275381 4/25 (16%)
leucine-rich repeat 374..398 CDD:275381 5/24 (21%)
leucine-rich repeat 399..424 CDD:275381 7/24 (29%)
leucine-rich repeat 425..450 CDD:275381 10/24 (42%)
leucine-rich repeat 451..475 CDD:275381 10/24 (42%)
leucine-rich repeat 476..501 CDD:275381 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457932
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I1756
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47209
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

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