DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and CG8272

DIOPT Version :10

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster


Alignment Length:563 Identity:114/563 - (20%)
Similarity:188/563 - (33%) Gaps:227/563 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 PHLHHPYGSMGINAASPLIM------QHQLHPPPIH-------SIEQLMLDDRFLSRFFQYFSPY 300
            ||||    |:.:....||.|      .:....|.::       .|::|.|.:.      ||.:. 
  Fly   127 PHLH----SLSLKRCLPLFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCEN------QYLTD- 180

  Fly   301 ERRILAQVCIKWRDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKLYNSLIRRGFHALGLVGASD 365
              .||.::               :..:|:|   |...|.||... .:|::.||.:.|   ..:||
  Fly   181 --AILMRL---------------TSFMPSL---EAINMSGCHIA-FHNAIHRRFYPA---TSSSD 221

  Fly   366 -----EDALDVVHSFPLASKHVHSLSLRCSSIS----DRGLETLLDHLQSLFELELAGCNEVTEA 421
                 |..|  ...|.|...::...:||..:.|    .:.|..|.|....|..|.||||.::.  
  Fly   222 HVLPSESVL--TFKFILTILNLQRRTLRVLNFSHTLIGQALLALCDLNLQLQRLYLAGCRQLN-- 282

  Fly   422 GLWACLT--------PRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPK 478
                |.|        |::.:|.|:..:.:.||.:.|:.|..|.|                     
  Fly   283 ----CTTILNFLATQPQLCALDLSATMCVNDENLAALVQTNPQL--------------------- 322

  Fly   479 QSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDG------------------- 524
             .|    |::..|..:||.|.:::. .|..|..|.:|.|..||..|                   
  Fly   323 -EH----LKVNGCLSITNAGAIHLA-KLKCLKSLDISNCDNLTSSGIIEGIASEENPVIQELNVS 381

  Fly   525 --------VELIAENLQKLRALDLSWCPR-ITDASLEYIACDLNQLEELTLDRCVHITDIGV--- 577
                    ::.||.||:.||:|.|:.|.. .||.:::.:...|..|.||:|:.|..:||..:   
  Fly   382 YLQICEECIKAIASNLRCLRSLHLNHCVNGATDEAIQSVIGQLRWLRELSLEHCSGLTDAALTGI 446

  Fly   578 ----------------------------------------------------------------- 577
                                                                             
  Fly   447 NISKLEMSRKQSGSQVSSMDNFYPPYSNTLAERDSLAGSLQSIKISLRSKAEDEIVRDARRKQAM 511

  Fly   578 ---------------GY-ISTMLSLTALFLRWCSQVRD----FGLQHL----CSMRNLQVLSLAG 618
                           |: |..:..|.:|.||.|:::.|    :||:|:    ..:.|.|.:||.|
  Fly   512 LAAYEMNLIREDDFEGHNIQQLRGLRSLNLRGCNKISDVSLKYGLKHIELRRLMLSNCQQISLLG 576

  Fly   619 CPLLTSSGLSSLIQLRHLQELELTNCPGASHELFDYLKEHLPR 661
            ...:.||..|       ::||:|::|...:.:....:...|||
  Fly   577 MEAMASSCPS-------IEELDLSDCYNITDKTIQVVTSKLPR 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 6/41 (15%)
leucine-rich repeat 382..406 CDD:275381 6/27 (22%)
AMN1 383..600 CDD:187754 64/344 (19%)
leucine-rich repeat 431..456 CDD:275381 6/24 (25%)
leucine-rich repeat 457..482 CDD:275381 1/24 (4%)
leucine-rich repeat 483..508 CDD:275381 6/24 (25%)
leucine-rich repeat 509..534 CDD:275381 11/51 (22%)
leucine-rich repeat 535..560 CDD:275381 8/25 (32%)
leucine-rich repeat 561..585 CDD:275381 9/107 (8%)
leucine-rich repeat 586..610 CDD:275381 9/31 (29%)
leucine-rich repeat 636..661 CDD:275381 5/24 (21%)
CG8272NP_001260812.1 F-box_SF 11..58 CDD:459239
leucine-rich repeat 129..166 CDD:275381 7/40 (18%)
leucine-rich repeat 167..192 CDD:275381 7/48 (15%)
leucine-rich repeat 193..244 CDD:275381 15/59 (25%)
C2 <231..274 CDD:472691 9/42 (21%)
leucine-rich repeat 246..269 CDD:275381 6/22 (27%)
AMN1 269..440 CDD:187754 48/203 (24%)
leucine-rich repeat 270..295 CDD:275381 8/30 (27%)
leucine-rich repeat 296..319 CDD:275381 6/22 (27%)
leucine-rich repeat 322..346 CDD:275381 8/50 (16%)
leucine-rich repeat 347..399 CDD:275381 11/51 (22%)
leucine-rich repeat 400..426 CDD:275381 8/25 (32%)
leucine-rich repeat 427..535 CDD:275381 9/107 (8%)
AMN1 515..>642 CDD:187754 26/105 (25%)
leucine-rich repeat 536..560 CDD:275381 9/23 (39%)
leucine-rich repeat 561..586 CDD:275381 7/24 (29%)
leucine-rich repeat 587..612 CDD:275381 5/24 (21%)
leucine-rich repeat 613..638 CDD:275381 114/563 (20%)
leucine-rich repeat 639..663 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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