DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and Fbxl15

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001101073.1 Gene:Fbxl15 / 309453 RGDID:1306444 Length:300 Species:Rattus norvegicus


Alignment Length:260 Identity:69/260 - (26%)
Similarity:107/260 - (41%) Gaps:36/260 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 IKWRDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKLYNSLIRRGFHA---LGLVGASDEDALDV 371
            :.|.|.|......|   :|      |||:....|       :.|.|.|   |.|......||..|
  Rat    22 LPWEDVLLPHVLNW---VP------LRQLLRLQR-------VSRAFRALVQLHLARLRRFDAAQV 70

  Fly   372 VHSFPLA--------SKHVHSLSLR-CSS-ISDRGLETLLDHLQSLFELELAGCNEVTEAGLWA- 425
            ....|.|        ::.:..|:|. |.. :.|..|..:|.....|..:.||||.:::...|.| 
  Rat    71 GPQIPRAALVRLLRDAEGLQELALAPCHEWLLDEDLVPVLARNPQLRSVALAGCGQLSRRALGAL 135

  Fly   426 ---CLTPRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQA-YHVTDAALGYFSPKQSHSLSIL 486
               |  ||:..:|||.|..:...|:..:|...|:|.|..|.| ..:.|.|:.|.:.::...|..|
  Rat   136 AEGC--PRLQRISLAHCDWVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSL 198

  Fly   487 RLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAENLQKLRALDLSWCPRITDASL 551
            .|.....:.:..:..:..:.|.|..|.|:||.::..|||..:||....||:|.:..|..:.:.||
  Rat   199 SLAVNANVGDTAVQELARNCPQLEHLDLTGCLRVGSDGVRTLAEYCPALRSLRVRHCHHVAEPSL 263

  Fly   552  551
              Rat   264  263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 6/25 (24%)
AMN1 383..600 CDD:187754 50/176 (28%)
leucine-rich repeat 431..456 CDD:275381 6/24 (25%)
leucine-rich repeat 457..482 CDD:275381 7/25 (28%)
leucine-rich repeat 483..508 CDD:275381 3/24 (13%)
leucine-rich repeat 509..534 CDD:275381 10/24 (42%)
leucine-rich repeat 535..560 CDD:275381 6/17 (35%)
leucine-rich repeat 561..585 CDD:275381
leucine-rich repeat 586..610 CDD:275381
leucine-rich repeat 636..661 CDD:275381
Fbxl15NP_001101073.1 F-box 18..55 CDD:395521 12/48 (25%)
leucine-rich repeat 62..88 CDD:275381 5/25 (20%)
leucine-rich repeat 89..115 CDD:275381 6/25 (24%)
Interaction with SMURF1. /evidence=ECO:0000250 113..269 44/153 (29%)
leucine-rich repeat 116..141 CDD:275381 8/26 (31%)
AMN1 <139..>268 CDD:187754 37/127 (29%)
leucine-rich repeat 142..167 CDD:275381 6/24 (25%)
leucine-rich repeat 168..194 CDD:275381 7/25 (28%)
leucine-rich repeat 195..220 CDD:275381 3/24 (13%)
leucine-rich repeat 221..245 CDD:275381 10/23 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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