DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and FBXL4

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001265645.1 Gene:FBXL4 / 26235 HGNCID:13601 Length:621 Species:Homo sapiens


Alignment Length:525 Identity:126/525 - (24%)
Similarity:197/525 - (37%) Gaps:135/525 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 TVKSIAKQMNITIPGGGVNPGSPTFSTMGMVAAQKAAASAGGTPLQLRKQLPNPHLHHPYGSMGI 260
            |:.::|...|: .|..|....:..|.|.|....|..:||     |..::..||      :.|...
Human    74 TMWNLAGVPNV-FPSSGDFTQTAVFRTYGTWWDQCPSAS-----LPFKRTPPN------FQSQDY 126

  Fly   261 NAASPLIMQHQLHPPPIHSIEQLMLDDRFLSRFFQYFSPYERRILAQVC------------IKWR 313
               ..|..:.|::|..:|.:|             .|......||||  |            ::|.
Human   127 ---VELTFEQQVYPTAVHVLE-------------TYHPGAVIRILA--CSANPYSPNPPAEVRWE 173

  Fly   314 DTLYRSPRYWSGLLPTLQCRELRQMPGCDRG-KLYNSLIRRGFHALGLVGASDEDALDVVHSFPL 377
                   ..||.....:...:.||...|.:. ....:|||...::..|...::.||: |:|.  :
Human   174 -------ILWSERPTKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAV-VLHG--V 228

  Fly   378 ASKHVHSLSLRCSSISDRGLE---------TLLDHLQSLFELELAGCNEVTEAGLWACLTPRIVS 433
            ..|.|  |||:.|.|....:|         ..:|.|...|...:.|  |....|.:..|...::.
Human   229 KDKPV--LSLKTSLIDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLG--EGPNNGYFDKLPYELIQ 289

  Fly   434 -----LSLADCINIADEAVGAVAQLL------PSLY-EFSLQAY--HVTDAALGYFSPKQSHSLS 484
                 |:|.|...:|.     ..:||      |..| ..:||.|  .:.|.:|.:.   ||....
Human   290 LILNHLTLPDLCRLAQ-----TCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFL---QSRCTL 346

  Fly   485 ILRLQSCWELTNHGIVNIVHSLPHLTV-------LSLSGCSKLTDDGVELIAENLQKLRALDLSW 542
            :..|...| ..|.|.:::......|.|       |.||....|.:..:|:|:|....|:||:||.
Human   347 VQWLNLSW-TGNRGFISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSS 410

  Fly   543 CPRITDASLEYIA--CDL----------------------NQLEELTLDRCVHITDIGVGYISTM 583
            |.::...:..:||  |.|                      ::|:.|:|..||.|.|..|  |::|
Human   411 CDKLPPQAFNHIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDV--IASM 473

  Fly   584 LSLTALFLR----W-CSQVRDFGLQHL---CSMRNLQVLSLAGCPLLTSS-GLSSLI--QLRHLQ 637
            :......||    | |..:.:.|:..|   |.:  |:.|.|..||.|.|| |..:.:  ||.:||
Human   474 IGAKCKKLRTLDLWRCKNITENGIAELASGCPL--LEELDLGWCPTLQSSTGCFTRLAHQLPNLQ 536

  Fly   638 ELELT 642
            :|.||
Human   537 KLFLT 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 9/32 (28%)
AMN1 383..600 CDD:187754 65/275 (24%)
leucine-rich repeat 431..456 CDD:275381 6/35 (17%)
leucine-rich repeat 457..482 CDD:275381 8/27 (30%)
leucine-rich repeat 483..508 CDD:275381 4/24 (17%)
leucine-rich repeat 509..534 CDD:275381 9/31 (29%)
leucine-rich repeat 535..560 CDD:275381 10/48 (21%)
leucine-rich repeat 561..585 CDD:275381 10/23 (43%)
leucine-rich repeat 586..610 CDD:275381 7/31 (23%)
leucine-rich repeat 636..661 CDD:275381 5/7 (71%)
FBXL4NP_001265645.1 F-box-like 280..318 CDD:315592 7/42 (17%)
leucine-rich repeat 295..317 CDD:275381 6/26 (23%)
leucine-rich repeat 318..346 CDD:275381 8/30 (27%)
leucine-rich repeat 347..376 CDD:275381 6/29 (21%)
LRR 1 376..397 5/20 (25%)
leucine-rich repeat 377..398 CDD:275381 6/20 (30%)
AMN1 394..601 CDD:332986 46/152 (30%)
LRR 2 402..421 6/18 (33%)
leucine-rich repeat 403..427 CDD:275381 8/23 (35%)
LRR 3 427..448 1/20 (5%)
leucine-rich repeat 428..452 CDD:275381 1/23 (4%)
LRR 4 452..474 9/23 (39%)
leucine-rich repeat 453..480 CDD:275381 10/28 (36%)
LRR 5 480..501 5/20 (25%)
leucine-rich repeat 481..506 CDD:275381 7/24 (29%)
LRR 6 504..524 9/21 (43%)
leucine-rich repeat 507..534 CDD:275381 11/26 (42%)
LRR 7 532..558 6/10 (60%)
leucine-rich repeat 535..560 CDD:275381 5/7 (71%)
LRR 8 559..583
leucine-rich repeat 561..586 CDD:275381
LRR 9 584..609
leucine-rich repeat 587..612 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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