DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and Amn1

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001106895.1 Gene:Amn1 / 232566 MGIID:2442933 Length:258 Species:Mus musculus


Alignment Length:295 Identity:70/295 - (23%)
Similarity:115/295 - (38%) Gaps:98/295 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 SKHVHSLSLRCSSISDRGLETLLDHLQSLFELELAGCNEVTEAGLWACLTPRIVSLSLADCINIA 443
            |:::..:....|:|.||.::.          :.:.|  .:|::.:...|.|.:..|.|..|    
Mouse    23 SRYISDIKYLPSNIKDRLIKI----------MSIRG--RITDSNISEVLHPEVQRLDLRSC---- 71

  Fly   444 DEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSHSLSILRLQSCWE----LTNHGIVNIVH 504
                                  .::|.||.:..  :...|..|.|:||.|    :|:.||..:..
Mouse    72 ----------------------DISDVALQHLC--KCRKLKALNLKSCREHRNSITSEGIKAVAS 112

  Fly   505 SLPHLTVLSLSGCSKLTDDGVELIAENLQKLRALDLSWCPRITDASLE-------YIAC-DLN-- 559
            |...|..:.|.||..:||:||..:|.|...|:.:||..|..|||.||.       ::.| |::  
Mouse   113 SCSDLHEIYLKGCCSVTDEGVLALALNCHLLKIIDLGGCLGITDVSLHALGKNCPFLQCVDISTT 177

  Fly   560 -----------------QLEELTLDRCVHITDIGVGYISTMLSLTALFLRWCSQVRDFGLQHLCS 607
                             ||||:.:..|:::||..|     ..:|||     |.::        | 
Mouse   178 QVSDNGVVALVSGPCAKQLEEINMRYCINLTDKAV-----EAALTA-----CPRI--------C- 223

  Fly   608 MRNLQVLSLAGCPLLTSSG---LSSLIQLRHLQEL 639
                 :|...||||:|...   |..||..|.|:::
Mouse   224 -----ILLFHGCPLITDRSQEVLEQLIGSRKLKQV 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 4/23 (17%)
AMN1 383..600 CDD:187754 57/247 (23%)
leucine-rich repeat 431..456 CDD:275381 3/24 (13%)
leucine-rich repeat 457..482 CDD:275381 3/24 (13%)
leucine-rich repeat 483..508 CDD:275381 10/28 (36%)
leucine-rich repeat 509..534 CDD:275381 10/24 (42%)
leucine-rich repeat 535..560 CDD:275381 11/51 (22%)
leucine-rich repeat 561..585 CDD:275381 7/23 (30%)
leucine-rich repeat 586..610 CDD:275381 5/23 (22%)
leucine-rich repeat 636..661 CDD:275381 1/4 (25%)
Amn1NP_001106895.1 leucine-rich repeat 15..38 CDD:275381 3/14 (21%)
AMN1 37..257 CDD:187754 67/281 (24%)
leucine-rich repeat 63..86 CDD:275381 6/50 (12%)
leucine-rich repeat 87..116 CDD:275381 10/28 (36%)
leucine-rich repeat 117..142 CDD:275381 10/24 (42%)
leucine-rich repeat 143..168 CDD:275381 9/24 (38%)
leucine-rich repeat 169..195 CDD:275381 2/25 (8%)
leucine-rich repeat 196..221 CDD:275381 11/34 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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