DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32085 and FBXL13

DIOPT Version :9

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001381423.1 Gene:FBXL13 / 222235 HGNCID:21658 Length:825 Species:Homo sapiens


Alignment Length:502 Identity:113/502 - (22%)
Similarity:198/502 - (39%) Gaps:133/502 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 MLDDRFLSRFFQYFSPYERRILAQVCIKWR-----DTLYRSPRYWS--GLLP------TLQCREL 335
            :|.:|.:.:.|.|.|..:..|..||...|.     ::|:.:..:.|  .::|      |||...|
Human   247 LLPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRL 311

  Fly   336 R----QMPGC-DRGKLYNSLIR-RGFHALGLVGA---SDEDALDVVHSFP--------------- 376
            .    ...|| .|.|.:.|:.. |....|.:...   :||....:....|               
Human   312 NVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNR 376

  Fly   377 ---LASKHVH---SLSLR-CSSISDRGLE--TLLDHLQSLFELELAGCNEVTEAGLW----ACLT 428
               |..:|.|   :|||. |...:|:||:  .|.:....|..|:|:||.:::..|..    :|  
Human   377 TMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSC-- 439

  Fly   429 PRIVSLSLADCINIADEAVGAVAQL-----------LPSLYEFSLQAY--------------HVT 468
            ..|:.|::.|...:.|..|.|:.:.           .|.:.:.:.:|.              .||
Human   440 TGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVT 504

  Fly   469 DAALGYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAEN-- 531
            ||:. .|..|...:||.:.:..|..:|:..:.:: ..|..||||:|:.|.::.|.|::...:.  
Human   505 DASF-KFIDKNYPNLSHIYMADCKGITDSSLRSL-SPLKQLTVLNLANCVRIGDMGLKQFLDGPA 567

  Fly   532 LQKLRALDLSWCPRITDASLEYIACDLNQLEELTLDRCVHITDIGVGYISTMLSLTALFLRW--- 593
            ..::|.|:||.|.|::|||:..::.....|..|:|..|.|:|..|:|||..:.||.::.|..   
Human   568 SMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDI 632

  Fly   594 ---------------------CSQVRDFGLQHLCSMR---------------------------N 610
                                 |.::.|.|:|..|...                           |
Human   633 SNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCIN 697

  Fly   611 LQVLSLAGCPLLTSSGLSSL-IQLRHLQELELTNCPGASHELFDYLK 656
            |..||:||||.:|.|.:..| .:..:|..|:::.|...:.::.:.|:
Human   698 LTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQ 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 leucine-rich repeat 382..406 CDD:275381 9/29 (31%)
AMN1 383..600 CDD:187754 66/277 (24%)
leucine-rich repeat 431..456 CDD:275381 6/35 (17%)
leucine-rich repeat 457..482 CDD:275381 7/38 (18%)
leucine-rich repeat 483..508 CDD:275381 5/24 (21%)
leucine-rich repeat 509..534 CDD:275381 8/26 (31%)
leucine-rich repeat 535..560 CDD:275381 9/24 (38%)
leucine-rich repeat 561..585 CDD:275381 10/23 (43%)
leucine-rich repeat 586..610 CDD:275381 7/74 (9%)
leucine-rich repeat 636..661 CDD:275381 4/21 (19%)
FBXL13NP_001381423.1 Sfi1 <112..>224 CDD:400658
F-box-like 245..289 CDD:403981 10/41 (24%)
leucine-rich repeat 285..312 CDD:275381 5/26 (19%)
AMN1 312..497 CDD:187754 36/186 (19%)
leucine-rich repeat 313..336 CDD:275381 5/22 (23%)
leucine-rich repeat 337..362 CDD:275381 3/24 (13%)
leucine-rich repeat 363..387 CDD:275381 2/23 (9%)
leucine-rich repeat 388..406 CDD:275381 7/17 (41%)
leucine-rich repeat 416..441 CDD:275381 7/26 (27%)
leucine-rich repeat 442..491 CDD:275381 8/48 (17%)
leucine-rich repeat 468..490 CDD:275381 2/21 (10%)
leucine-rich repeat 492..515 CDD:275381 6/23 (26%)
leucine-rich repeat 518..542 CDD:275381 5/24 (21%)
AMN1 529..737 CDD:187754 51/208 (25%)
leucine-rich repeat 543..570 CDD:275381 8/26 (31%)
leucine-rich repeat 571..596 CDD:275381 9/24 (38%)
leucine-rich repeat 597..645 CDD:275381 13/47 (28%)
leucine-rich repeat 646..671 CDD:275381 5/24 (21%)
leucine-rich repeat 672..697 CDD:275381 0/24 (0%)
leucine-rich repeat 698..723 CDD:275381 10/24 (42%)
leucine-rich repeat 724..749 CDD:275381 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.