Protein Alignment Polr3H and Polr3h

DIOPT Version :10

• Sequence 1: NP_648490.1
• Gene: Polr3H / 39310
• FlyBaseID: FBgn0036188
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_084505.2
• Gene: Polr3h / 78929
• MGIID: 1926179
• Length: 204
• Species: Mus musculus
• Alignment Length: 215
• Identity: 121/215 - (56%)
• Similarity: 157/215 - (73%)
• Gaps: 17/215 - (7%)

  Fly     1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGA 65
            ||||.|:.|.|||.|.||..||.|::.:|:::||||||:.||||||.|.||..|:|:.:.|||||
Mouse     1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGA 65

  Fly    66 SHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWE 130
            |||:|.||||||.|.:..::.|||:.||.|||||:||||||||||..:||.|::||||||.||||
Mouse    66 SHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWE 130

  Fly   131 YPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEV---K 192
            |..|:|| |||:||.||.|:|||..|.|.:|||.||             |:|.|:::|:|:   :
Mouse   131 YETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGP-------------SSAEAASSSEELPKKE 181

  Fly   193 TPYRIIGAINESGLGVLSWW 212
            .||.::|:|:|.|||:||||
Mouse   182 APYTLVGSISEPGLGLLSWW 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3H	NP_648490.1	RNAP_III_Rpc25_N	2..81	CDD:239822	48/78 (62%)
		RNA_pol_Rbc25	84..212	CDD:400543	70/130 (54%)
Polr3h	NP_084505.2	RNAP_III_Rpc25_N	2..81	CDD:239822	48/78 (62%)
		RNA_pol_Rbc25	83..201	CDD:400543	70/131 (53%)