Protein Alignment CG7339 and rpc-25

DIOPT Version :9

• Sequence 1: NP_001261720.1
• Gene: CG7339 / 39310
• FlyBaseID: FBgn0036188
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_505625.1
• Gene: rpc-25 / 179418
• WormBaseID: WBGene00014111
• Length: 239
• Species: Caenorhabditis elegans
• Alignment Length: 234
• Identity: 88/234 - (37%)
• Similarity: 127/234 - (54%)
• Gaps: 29/234 - (12%)

  Fly     1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGA 65
            ||:|:.|.|.|.|.|.|........::..::.:||||::.::||||.:.||..:.||.||||:|.
 Worm     1 MFILSLLHDTVAIQPHQLSSDQQIVIKKRLNERLANKIIPDLGLCICVYDINEIGDSYILPGEGD 65

  Fly    66 SHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWE 130
            ....|.||.:||||.|..||..|:...||:|:.:|:.||:||.:|...|..|..|:|..|.|.||
 Worm    66 CRARVKFRMIVFRPFVDEVIEAKVIGSSRQGLCLTIQFFEDIFVPAEKLPEPHVFEEEGQVWYWE 130

  Fly   131 YPLEDG---AKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVK 192
            |..|||   ||  |:||.|:.::|||:..||::..|                     ..|.:|.|
 Worm   131 YAQEDGEPPAK--LYMDPGKIVRFRVTEIIFKDLKP---------------------ELTHEERK 172

  Fly   193 T--PYRIIGAINESGLGVLSWWDQQGKDDEQ-DDEEDEE 228
            |  ...|.|.:..:|||.:.||..:.:|||. :||:||:
 Worm   173 TEKSMEIKGTMASTGLGCIGWWAAEDEDDEAVEDEQDEQ 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7339	NP_001261720.1	RPB7	1..212	CDD:224020	79/215 (37%)
		RNAP_III_Rpc25_N	2..81	CDD:239822	32/78 (41%)
		RNA_pol_Rbc25	79..212	CDD:285491	47/137 (34%)
rpc-25	NP_505625.1	RPB7	1..194	CDD:224020	79/215 (37%)
		RNAP_III_Rpc25_N	2..81	CDD:239822	32/78 (41%)
		RNA_pol_Rbc25	79..194	CDD:285491	47/137 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159144
Domainoid	1	1.000	80	1.000	Domainoid score	I5584
eggNOG	1	0.900	-	-		E1_COG1095
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6337
Inparanoid	1	1.050	152	1.000	Inparanoid score	I2950
Isobase	1	0.950	-	0	Normalized mean entropy	S661
OMA	1	1.010	-	-		QHG54252
OrthoDB	1	1.010	-	-		D1430056at2759
OrthoFinder	1	1.000	-	-		FOG0004963
OrthoInspector	1	1.000	-	-		oto17461
orthoMCL	1	0.900	-	-		OOG6_101831
Panther	1	1.100	-	-	LDO	PTHR12709
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1195
SonicParanoid	1	1.000	-	-		X3501
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	18	17.750