DRSC/TRiP Functional Genomics Resources

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Protein Alignment RIOK1 and AT5G37350

DIOPT Version :9

Sequence 1:NP_648489.1 Gene:RIOK1 / 39309 FlyBaseID:FBgn0036187 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_851100.1 Gene:AT5G37350 / 833709 AraportID:AT5G37350 Length:531 Species:Arabidopsis thaliana


Alignment Length:558 Identity:243/558 - (43%)
Similarity:330/558 - (59%) Gaps:60/558 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VIATANEEDEPEDEEPEEYDEDDYD-------DIGDDYDTY-----EEAYTGFNKLHVQPQLTNA 106
            |:|....:..|..|..||.::||.|       ||.:..|..     :|...|...||.  :..||
plant     6 VVAEPPPKITPFVEYEEELEDDDDDLSLSSDSDIAEALDWLDGKDDDELIGGGFSLHA--RRPNA 68

  Fly   107 SGGGSGGGAGGASGGSQRVSSYQPNEKLLRRYSARIN---VEKYDPTTNMS-AQAANRLVNFDRR 167
            .||         .|.....|:.||.....::.::.:.   :|.::....:. :.:....:....|
plant    69 HGG---------HGSRPNSSALQPISNKAQKLTSHVRASPLEGWEGRVKVGMSNSVTTAIRGSLR 124

  Fly   168 D----RTQVRDKHDRATAEQVMDPRTRMILFKLLNRGMIQEINGCISTGKEANVYHAVSKNGEEE 228
            |    |::..||.||||.||.:||||||:||::||||:..::|||||||||||||||...:| .|
plant   125 DTEIGRSRNTDKADRATVEQALDPRTRMVLFRMLNRGVFNDVNGCISTGKEANVYHATKSDG-SE 188

  Fly   229 FAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKHNPRKMVRTWAEKEMRNYLRMRNAGVPVPEPIL 293
            .|||:||||:|||||||:||.|::|||:|||:|||||||:||||||.||..|:..||:..|..||
plant   189 LAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCRHNPRKMVKTWAEKEQRNLKRLHAAGIRCPAVIL 253

  Fly   294 LRSHVLVMRFCGRDGWPAPKLKDVELSTSKARELYRDCVVIMWRIYNQCRLVHADLSEFNILLQD 358
            ||.|||||.|.|||||.||:|||..||..|.||.|.:.::.|..:|.:|:|||.||||:|||..:
plant   254 LRLHVLVMEFIGRDGWAAPRLKDAALSLDKLRECYLELIIQMRVLYQKCKLVHGDLSEYNILYFE 318

  Fly   359 GQLVIIDVSQSVEHDHPHSFDFLRKDCTNISEFFRKRAVATMTVKELFDFITDQTITTENMEECL 423
            |.|.||||||||:.|||.:.:|||:||.::|:||:|..||.||::||||||.|.||:.||::..|
plant   319 GHLYIIDVSQSVDLDHPLALNFLREDCDHVSDFFKKHGVAVMTIRELFDFIVDPTISDENVDSYL 383

  Fly   424 ERISERIKDRDFDAISAQEKIDEAVWQNTYIPKRLDEVRHFERDVAKAKQGVQQ-NLIYGKITGL 487
            |.:..::.:|  ..||.:::|.::|:..:||||.||.|.:.|.||||...|... :::|..||||
plant   384 EEVQRKVIER--GEISVEDEIADSVFMKSYIPKSLDAVNNPEADVAKITSGQDTGDMLYQTITGL 446

  Fly   488 TSDLDVQQKPDVLQ-SSTAKEDDGSEAQTSGSEDEDNSQDNDNDEDAKKFKNSARPREESPESKK 551
            .   |...|.|..| ...|:|::..|.:.||.|.|:.|:                 :|..||.||
plant   447 K---DALPKVDEQQIEVNAEEEEEEEEEGSGEESEEESE-----------------KELGPEDKK 491

  Fly   552 A----RKKAVKDAKAEQRKVKVKKHVKKRKEKMGSMKK 585
            |    .||.||:.|.|.||.|..|.|||||:|:....|
plant   492 AARKEHKKKVKEEKRESRKTKTPKSVKKRKKKVSKPHK 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIOK1NP_648489.1 RIO1 164..420 CDD:224632 158/259 (61%)
RIO1_euk 205..395 CDD:270698 119/189 (63%)
AT5G37350NP_851100.1 RIO1 124..395 CDD:224632 161/273 (59%)
RIO1_euk 166..355 CDD:270698 119/189 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 247 1.000 Domainoid score I539
eggNOG 1 0.900 - - E1_COG1718
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6950
Inparanoid 1 1.050 421 1.000 Inparanoid score I433
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1238900at2759
OrthoFinder 1 1.000 - - FOG0003427
OrthoInspector 1 1.000 - - otm2919
orthoMCL 1 0.900 - - OOG6_101068
Panther 1 1.100 - - LDO PTHR45723
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2320
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

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