DRSC/TRiP Functional Genomics Resources

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Protein Alignment RIOK1 and riok3

DIOPT Version :9

Sequence 1:NP_648489.1 Gene:RIOK1 / 39309 FlyBaseID:FBgn0036187 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001004996.1 Gene:riok3 / 448471 XenbaseID:XB-GENE-971902 Length:508 Species:Xenopus tropicalis


Alignment Length:462 Identity:159/462 - (34%)
Similarity:253/462 - (54%) Gaps:69/462 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DAEEDEEDLRSSEWTNDFKNLTLKHEIFKDIKLTPKEDCDDLAQVIATANEEDEPEDEEPEEYDE 74
            |.|.|.:.||..:..|....:::..|.::  |:.|.|             |.|..|||.      
 Frog    83 DKEYDAQLLREEKKFNGDSKVSISFENYR--KVHPSE-------------ENDSSEDEV------ 126

  Fly    75 DDYDDIGDDYDTYEEAYTGFNKLHVQPQLTNASGGGSGGGAGGASGGSQRVSSYQPNEKLLRRYS 139
                   |..||..:.|.. :|....|:             .|..|..:.:::........|:.:
 Frog   127 -------DWQDTRHDPYKA-DKPTPTPK-------------KGFVGKGKDITTKHDEVVCGRKNT 170

  Fly   140 ARINVEKYDPTTN------MSAQAANRLVN-------FDRRDRTQVRDKHDRATAEQVMDPRTRM 191
            ||  :|.:.|...      |..:.:|::.|       .::|...::.||.:.:|||:|:||:||:
 Frog   171 AR--MENFAPEFQVGDGIVMDLKLSNQVFNALKQHSISEQRKSARLHDKKEVSTAEKVVDPKTRL 233

  Fly   192 ILFKLLNRGMIQEINGCISTGKEANVYHAVSKNGEE-----EFAIKIYKTSILVFKDRDKYVSGE 251
            :|:|::|.|:::.||||:|||||:.|:||...:.|:     |.|||::||::..||:||||:..:
 Frog   234 LLYKMVNSGVLETINGCVSTGKESVVFHASGGSMEDQEIPAECAIKVFKTTLNEFKNRDKYIKDD 298

  Fly   252 FRFRHGYCKHNPRKMVRTWAEKEMRNYLRMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPKLKD 316
            :||:..:.|.||||::|.||||||.|..||..||:|.||.:||:.|||||.|.|.|..|||.||:
 Frog   299 YRFKERFSKLNPRKIIRMWAEKEMHNLKRMHKAGIPCPEVVLLKKHVLVMSFIGNDQIPAPTLKE 363

  Fly   317 VELSTSKARELYRDCVVIMWRIYNQCRLVHADLSEFNILLQDGQLVIIDVSQSVEHDHPHSFDFL 381
            .:|....:::.|...:.:|.::|.||.||||||||:|::..||::.:||||||||..|||..:||
 Frog   364 AKLGLEDSKQAYYQVLSMMKQLYEQCNLVHADLSEYNMMWHDGKVWLIDVSQSVEPTHPHGLEFL 428

  Fly   382 RKDCTNISEFFRKRAVA-TMTVKELFDFITDQTITTENME------ECLERISERIKDRDFDAIS 439
            .:||.|:|:||:|..|: |...:|||:.::...|:::|..      |.||:::|.........:|
 Frog   429 YRDCRNVSQFFQKAGVSETPHARELFNIVSGLNISSDNQVDFMAEIEALEKVNEDHVQMHGKKVS 493

  Fly   440 AQEKIDE 446
            ..:|.|:
 Frog   494 IYQKDDD 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIOK1NP_648489.1 RIO1 164..420 CDD:224632 121/261 (46%)
RIO1_euk 205..395 CDD:270698 98/194 (51%)
riok3NP_001004996.1 RIO3_euk 247..442 CDD:270697 98/194 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1238900at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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