DRSC/TRiP Functional Genomics Resources

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Protein Alignment RIOK1 and riok3

DIOPT Version :9

Sequence 1:NP_648489.1 Gene:RIOK1 / 39309 FlyBaseID:FBgn0036187 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001003614.1 Gene:riok3 / 445220 ZFINID:ZDB-GENE-040801-133 Length:507 Species:Danio rerio


Alignment Length:403 Identity:147/403 - (36%)
Similarity:236/403 - (58%) Gaps:45/403 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 DEDDYDDIGDDYDTYEEAYTGFNKLHVQPQLTNASGGGSGGGAGGASGGSQRVSSYQPNEKLLRR 137
            |.|..:|..|..||..:.|..     |:|..|...         |..|..:.:::....|...|:
Zfish   116 DSDSSEDEVDWQDTRHDPYRA-----VKPTTTPKK---------GFVGKGKNITTKHDEEICGRK 166

  Fly   138 YSARINVEKYDPTTN------MSAQAANRLVN-------FDRRDRTQVRDKHDRATAEQVMDPRT 189
            .:||  ::.:.|..:      |..:.:|::.|       .::|...::.:|.:.:||||.:||:|
Zfish   167 NTAR--MDNFAPEVHVGDGIGMDLKLSNQVYNALKRHCQTEQRRSARLHEKKEHSTAEQAVDPKT 229

  Fly   190 RMILFKLLNRGMIQEINGCISTGKEANVYHAVSKNG--------EEEFAIKIYKTSILVFKDRDK 246
            |::::|::|.|:::.||||||||||:.|:||   ||        .||..:|::||::..||:|||
Zfish   230 RLLMYKMVNAGILENINGCISTGKESVVFHA---NGGSFEEMIVPEECVLKVFKTTLNEFKNRDK 291

  Fly   247 YVSGEFRFRHGYCKHNPRKMVRTWAEKEMRNYLRMRNAGVPVPEPILLRSHVLVMRFCGRDGWPA 311
            |:..::||:..:.|.||||::|.||||||.|..|::.||:|.||.::|:.|:|||.|.|:|..||
Zfish   292 YIKDDYRFKDRFSKLNPRKIIRLWAEKEMHNLTRIKKAGIPCPEVVILKKHILVMSFIGKDHAPA 356

  Fly   312 PKLKDVELSTSKARELYRDCVVIMWRIYNQCRLVHADLSEFNILLQDGQLVIIDVSQSVEHDHPH 376
            |||||..|::...:..|...:.:|.|:|..|.||||||||:|:|..|.|:..||||||:|..|||
Zfish   357 PKLKDAILNSEDMKNAYYQVLNMMQRLYQDCNLVHADLSEYNMLWHDRQVWFIDVSQSIEPTHPH 421

  Fly   377 SFDFLRKDCTNISEFFRKRAVA-TMTVKELFDFITDQTITTENMEECLERISERIKDRDFDAISA 440
            ..:||.:||.|::.||:|..|| ...|.|||:.::...|.::|..:.|.:| |.::.|:.|.:  
Zfish   422 GLEFLFRDCRNVATFFQKAGVAEAFNVFELFNTVSGLQINSDNEADFLAQI-EALEKRNEDHV-- 483

  Fly   441 QEKIDEAVWQNTY 453
             :|..:.::.:||
Zfish   484 -QKSGKKIFSDTY 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIOK1NP_648489.1 RIO1 164..420 CDD:224632 119/264 (45%)
RIO1_euk 205..395 CDD:270698 97/197 (49%)
riok3NP_001003614.1 RIO1 206..442 CDD:224632 111/238 (47%)
RIO3_euk 245..440 CDD:270697 97/197 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1718
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1238900at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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