DRSC/TRiP Functional Genomics Resources

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Protein Alignment RIOK1 and RIOK2

DIOPT Version :9

Sequence 1:NP_648489.1 Gene:RIOK1 / 39309 FlyBaseID:FBgn0036187 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_651365.1 Gene:RIOK2 / 43046 FlyBaseID:FBgn0039306 Length:538 Species:Drosophila melanogaster


Alignment Length:469 Identity:100/469 - (21%)
Similarity:188/469 - (40%) Gaps:123/469 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 MILFKLLNRGMIQEINGCISTGKEANVYHAVSKNGEEEFAIKIYKTSILVFKDRDKYVSGEFRFR 255
            :.|..|..||.:......|..|||:|:|....:.| ....:|:::.....|::    |..: |..
  Fly    83 LALKSLTLRGSVSSFGNQIGIGKESNIYVVADEEG-TPICLKLHRLGRTCFRN----VKAK-RDY 141

  Fly   256 HGYCKHNPRKMVRTW-------AEKEMRNYLRMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPK 313
            ||      |:...:|       |.:|......:.:.|.|||:||....|.::|...  .|||..:
  Fly   142 HG------RRHKASWLYLSRISATREFAYMSALYDRGFPVPKPIDFNRHCVLMDLV--KGWPMTQ 198

  Fly   314 LKDVELSTSKARELYRDCVVIMWRIYNQCRLVHADLSEFNILLQD-GQLVIIDVSQSVEHDHPHS 377
            :.::    ..|.::|.|.:.::.|:.|. .::|.|.:|||:::.| |:.::||..|.:...|.::
  Fly   199 VHEL----LDAPQVYDDLMNLIVRLGNS-GVIHGDFNEFNLMVTDAGKPILIDFPQMMSTSHENA 258

  Fly   378 FDFLRKDCTNISEFFRKR-AVATMTVKELFDFITDQTIT----------TENMEECL-------E 424
            ..|..:|...:.|.||:: ...:....:..|.:.:..:.          |:.||:.|       :
  Fly   259 EFFFERDVNCVREMFRRKFGYESEDYPKFSDLVREDDLDAEVHCTGYGFTKEMEQDLLEEYGMVD 323

  Fly   425 RISERIKDRDFD--------AISAQEKIDEAVWQNTYIPKRLDEVRHFE-RDVAKAKQGVQQ--- 477
            :..|..:..|.:        ..:|..:|||...|..      :||.:.| :...|:...|::   
  Fly   324 QADEEDEGEDLEEEEEPPTLVTAASVEIDECRRQVE------NEVIYSEAKPTQKSDDAVRRYIE 382

  Fly   478 -------NLIYG-KITGLT--SDLDVQ---QKPDVLQSSTAKEDDGSEAQTSGSEDEDNSQDNDN 529
                   ||..| ::...|  ..||:.   :.|||:.         .||:||.:        |..
  Fly   383 SCTQYLGNLSVGPEVPDQTMPKKLDISLPAETPDVIP---------FEAETSAT--------NTV 430

  Fly   530 DEDAKKFKNSARPREESPE-------SKKARKKAVK----DAKAE-------------------Q 564
            :||.|...::....:|.||       |:..|.|.|:    ||:::                   :
  Fly   431 EEDVKSISSNDLDTDEVPELVGLDPNSRMYRLKMVEQMLNDARSQRSYSTTTSTIAPSVITDRIR 495

  Fly   565 RKVKVKKHVKKRKE 578
            |.:.:|:..::||:
  Fly   496 RNMDIKEKREQRKK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIOK1NP_648489.1 RIO1 164..420 CDD:224632 55/247 (22%)
RIO1_euk 205..395 CDD:270698 49/197 (25%)
RIOK2NP_651365.1 RIO2 3..282 CDD:223554 53/217 (24%)
Rio2_N 9..91 CDD:286310 2/7 (29%)
RIO2_C 94..276 CDD:270695 49/200 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457240
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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