DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RIOK1 and riok1

DIOPT Version :10

Sequence 1:NP_648489.1 Gene:RIOK1 / 39309 FlyBaseID:FBgn0036187 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_998160.1 Gene:riok1 / 406268 ZFINID:ZDB-GENE-040426-1927 Length:552 Species:Danio rerio


Alignment Length:595 Identity:275/595 - (46%)
Similarity:373/595 - (62%) Gaps:68/595 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KYSDAEEDEEDLRSSEWTNDFKNLTLKHEIFKDIKLTP-KEDCDDLAQVIATANEEDEPEDEEPE 70
            ::.||:|.|.                        .::| |...::....:...:.|:..:.|..|
Zfish     8 QFDDADESES------------------------VISPEKPSLENRLDEVTLQSVENNKQKENEE 48

  Fly    71 EYDEDDYDDIGDD--YDTYEEAYTGFNKLHVQPQLTNASGGGSGGGAGGASGGSQRVSSYQPNEK 133
            :||||:.||..||  :|..|.|...|.|.:      .|...|....|...:..::.:....|::|
Zfish    49 DYDEDEEDDDDDDDEWDWNESAGGDFTKRY------TAMRTGCNPQANRQNSNNKSIKMSTPSDK 107

  Fly   134 LLRRYSARINVEKYDPTTNMSAQAANRLVNFDRR---DRTQVRDKHDRATAEQVMDPRTRMILFK 195
            :||::..:||::|    .:.:....|::....::   |..:|:||.||||.|||:||||||||||
Zfish   108 VLRKFENKINLDK----LSYADSVINKVTVMQKQREADTFRVKDKSDRATVEQVLDPRTRMILFK 168

  Fly   196 LLNRGMIQEINGCISTGKEANVYHAVSKNGEEEFAIKIYKTSILVFKDRDKYVSGEFRFRHGYCK 260
            :|:||:..:||||||||||||||||.:..||.. ||||||||||:||||||||||||||||||||
Zfish   169 MLSRGVFSQINGCISTGKEANVYHATTAKGESR-AIKIYKTSILLFKDRDKYVSGEFRFRHGYCK 232

  Fly   261 HNPRKMVRTWAEKEMRNYLRMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPKLKDVELSTSKAR 325
            .||||||||||||||||.:|::.|.:|.||||:||||||||.|.|||..|||.||:..||.||||
Zfish   233 GNPRKMVRTWAEKEMRNLIRLQTAQIPSPEPIMLRSHVLVMSFIGRDDTPAPLLKNAVLSESKAR 297

  Fly   326 ELYRDCVVIMWRIYNQCRLVHADLSEFNILLQDGQLVIIDVSQSVEHDHPHSFDFLRKDCTNISE 390
            |||...:..|..:|::.|||||||||:|:|..:|:..||||||||||||||:.:||||||:|:::
Zfish   298 ELYLQIIQNMRIMYSEARLVHADLSEYNMLYHNGEAYIIDVSQSVEHDHPHALEFLRKDCSNVND 362

  Fly   391 FFRKRAVATMTVKELFDFITDQTITTENMEECLERISERIKDRDFDAISAQEKIDEAVWQNTYIP 455
            ||::..||.|||:|||:|:||.:|||:|:.:.|::..|...:|..:..|.|:|:||.|::..|||
Zfish   363 FFQRHNVAVMTVRELFEFVTDPSITTDNINQYLDKAMEIASERTAEERSDQDKVDEEVFKKAYIP 427

  Fly   456 KRLDEVRHFERDV---AKAKQGVQ------QNLIYGKITGLTSDLD-VQQKPDVLQSSTAKEDDG 510
            :.|:||.|:||||   .|.|:...      .|::|..:|||..||. ||..|.:|:.||..|..|
Zfish   428 RTLNEVTHYERDVDTMMKKKEDTSSEDTNTDNILYQTVTGLRKDLSGVQTVPSILEDSTKDESSG 492

  Fly   511 SEAQTSGSEDEDNSQDNDNDEDAKKFKNSARPREESPESKKARKKAVKDAKAEQRKVKVKKHVKK 575
            ||.:    ||||       ||:....:..|:|      .:|.:||.||:|:.|:||.||.|||||
Zfish   493 SEEE----EDED-------DEEKSGEETEAQP------DRKEQKKLVKEAQREKRKNKVPKHVKK 540

  Fly   576 RKEKMGSMKK 585
            ||||:...||
Zfish   541 RKEKVAKTKK 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIOK1NP_648489.1 RIO1_euk 205..395 CDD:270698 134/189 (71%)
riok1NP_998160.1 RIO1_euk 178..367 CDD:270698 134/189 (71%)

Return to query results.
Submit another query.