DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6071 and Rnpep

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_112359.2 Gene:Rnpep / 81761 RGDID:621137 Length:650 Species:Rattus norvegicus


Alignment Length:560 Identity:103/560 - (18%)
Similarity:200/560 - (35%) Gaps:151/560 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 FPCFDDPRFRTPYNITLVHDRKYVALSNMPPVEEK-PYKEIENYVSTTFMGSPPLATQQVMWTLH 223
            |||||.|..:..|:..:.....:.|:.:....|.: |.|..       |..:.|:.:..:...:.
  Rat   179 FPCFDTPAVKCTYSALVEVPDGFTAVMSASTWERRGPNKFF-------FQMNQPIPSYLIALAIG 236

  Fly   224 QLEKVYSGPAAAGENITVWSRPHLAEKLAK-----VPEMT--------PNLFSKYETLFAYPLPK 275
            .|.....||.:     .||:.|.|.|...:     :.|..        |.::.:|:.||   :|.
  Rat   237 DLASAEVGPRS-----RVWAEPCLIEAAKEEYNGVIEEFLATGEKLFGPYVWGRYDLLF---MPP 293

  Fly   276 GADWGGKVDHVVLPRYTEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLVNLEDS 340
            ...:|| :::..|...|.      .::.|:          .||.:.:...::..|.|.||...:.
  Rat   294 SFPFGG-MENPCLTFVTP------CLLAGD----------RSLADVIIHEISHSWFGNLVTNANW 341

  Fly   341 DEEYVRNGINYYLSVQVMAM-------DKEAYNTTHLSKTRLDVLYHDS-LAKVK---SIATDVK 394
            .|.::..|...|...::..:       ..||.....|.:..:||...:: |.|::   ....|..
  Rat   342 GEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMDVSGEENPLNKLRVKIEPGVDPD 406

  Fly   395 ESGHQKLRKKKMCLLIHMLKVALGDK----LFLKGLQEFFKRYANSSASSKELWEEFQRGARRSH 455
            ::.::...:|..|.:.::..: :||:    .|||...:.||..:..:....|.:.|:....::. 
  Rat   407 DTYNETPYEKGYCFVSYLAHL-VGDQEQFDKFLKAYVDEFKFQSILAEDFLEFYLEYFPELKKK- 469

  Fly   456 QLPTGV-SLPTV-MESWMKQPGFP---------------------LLTVQRDDAKQI--VTITQS 495
                || |:|.. ...|:..||:|                     |......|.:.|  |.|:..
  Rat   470 ----GVDSIPGFEFNRWLNTPGWPPYLPDLSPGDSLMKPAEELAELWAASEPDMQAIEAVAISTW 530

  Fly   496 RYYQ--KYLDNSSNDCWWVPVAYIVRNLTLP--QVEWLGCQKNSRDILELSHIANPEDWLLINVD 556
            :.||  .:||.            |::...||  .|:.||     ....::|:..|.|        
  Rat   531 KTYQLVYFLDK------------ILQKSPLPPGNVKKLG-----ETYPKISNAQNAE-------- 570

  Fly   557 AAVPLRVFYDSYNLQLISEALRQDFTQIPELSRIQLVDDALSLSWSGRLPYNVTL-NVISYLSNE 620
                ||:.:...   ::....:::|.::.:..:.|           |:..|.:.| :.:...|..
  Rat   571 ----LRLRWGQI---ILKNDHQEEFWKVKDFLQSQ-----------GKQKYTLPLYHAMMGGSEM 617

  Fly   621 TSVLVWETALLNLEKLQS-IMRMTTGFRIFKLYMQKLIEP 659
            ...|..||......:|.| ::.          |:|:::||
  Rat   618 ARTLAKETFAATASQLHSNVVN----------YVQQILEP 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 67/347 (19%)
ERAP1_C 551..929 CDD:288671 17/111 (15%)
RnpepNP_112359.2 M1_LTA4H 24..484 CDD:341062 65/342 (19%)
Substrate binding. /evidence=ECO:0000250 298..302 2/4 (50%)
Leuk-A4-hydro_C 530..645 CDD:401171 28/167 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349329
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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