DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6071 and RNPEP

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_064601.3 Gene:RNPEP / 6051 HGNCID:10078 Length:650 Species:Homo sapiens


Alignment Length:568 Identity:103/568 - (18%)
Similarity:194/568 - (34%) Gaps:167/568 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 FPCFDDPRFRTPYNITLVHDRKYVALSNMPPVEEK-PYKEIENYVSTTFMGSPPLATQQVMWTLH 223
            |||||.|..:..|:..:.....:.|:.:....|:: |.|..       |....|:.:..:...:.
Human   179 FPCFDTPAVKYKYSALIEVPDGFTAVMSASTWEKRGPNKFF-------FQMCQPIPSYLIALAIG 236

  Fly   224 QLEKVYSGPAAAGENITVWSRPHL------------------AEKLAKVPEMTPNLFSKYETLFA 270
            .|.....||.:     .||:.|.|                  .|||     ..|.::.:|:.|| 
Human   237 DLVSAEVGPRS-----RVWAEPCLIDAAKEEYNGVIEEFLATGEKL-----FGPYVWGRYDLLF- 290

  Fly   271 YPLPKGADWGGKVDHVVLPRYTEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLV 335
              :|....:|| :::..|...|.      .::.|:          .||.:.:...::..|.|.||
Human   291 --MPPSFPFGG-MENPCLTFVTP------CLLAGD----------RSLADVIIHEISHSWFGNLV 336

  Fly   336 NLEDSDEEYVRNGINYYLSVQVMAM-------DKEAYNTTHLSKTRLDVLYHDS-LAKVK---SI 389
            ...:..|.::..|...|...::..:       ..||.....|.:..:|:...:: |.|::   ..
Human   337 TNANWGEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMDITGEENPLNKLRVKIEP 401

  Fly   390 ATDVKESGHQKLRKKKMCLLIHMLKVALGDKLFLKGLQEFFKRYANSSASSKELWEEF------- 447
            ..|..::.::...:|..|.:.::..: :||:   .....|.|.|.:.......|.::|       
Human   402 GVDPDDTYNETPYEKGFCFVSYLAHL-VGDQ---DQFDSFLKAYVHEFKFRSILADDFLDFYLEY 462

  Fly   448 --QRGARRSHQLPTGVSLPTVMESWMKQPGFP---------------------LLTVQRDDAKQI 489
              :...:|...:| |..    .:.|:..||:|                     |...:..|.|.|
Human   463 FPELKKKRVDIIP-GFE----FDRWLNTPGWPPYLPDLSPGDSLMKPAEELAQLWAAEELDMKAI 522

  Fly   490 --VTITQSRYYQ--KYLDNSSNDCWWVPVAYIVRNLTLP--QVEWLGCQKNSRDILELSHIANPE 548
              |.|:..:.||  .:||.            |::...||  .|:.||....|     :|:..|.|
Human   523 EAVAISPWKTYQLVYFLDK------------ILQKSPLPPGNVKKLGDTYPS-----ISNARNAE 570

  Fly   549 DWLLINVDAAVPLRVFYDSYNLQLISEALRQDFTQIPELSRIQLVDDALSLSWSGRLPYNVTL-N 612
                        ||:.:...   ::....::||.::.|....|           |:..|.:.| :
Human   571 ------------LRLRWGQI---VLKNDHQEDFWKVKEFLHNQ-----------GKQKYTLPLYH 609

  Fly   613 VISYLSNETSVLVWETALLNLEKLQS-IMRMTTGFRIFKLYMQKLIEP 659
            .:...|.....|..||......:|.| ::.          |:|:::.|
Human   610 AMMGGSEVAQTLAKETFASTASQLHSNVVN----------YVQQIVAP 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 64/355 (18%)
ERAP1_C 551..929 CDD:288671 18/111 (16%)
RNPEPNP_064601.3 leuko_A4_hydro 24..634 CDD:274120 98/543 (18%)
M1_LTA4H 24..484 CDD:189006 62/350 (18%)
Substrate binding. /evidence=ECO:0000250 298..302 2/4 (50%)
Leuk-A4-hydro_C 504..644 CDD:286244 37/192 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155446
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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