DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6071 and lta4h

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_998451.1 Gene:lta4h / 406575 ZFINID:ZDB-GENE-040426-2477 Length:611 Species:Danio rerio


Alignment Length:616 Identity:127/616 - (20%)
Similarity:228/616 - (37%) Gaps:149/616 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EQNQFEGIVSIDIEATQPT-RVIYLNSLNITISRQRTWIYRWASGR----KIGALQIKRIIKKTS 99
            :::..:|.|::.:|..:.. ..:.|:|.::.||:..      |:|:    ::||   |...|.:.
Zfish    30 DRHVLKGKVALTVEVLEDKFSSLTLDSKDLKISKVS------ANGQAAKFELGA---KHKFKGSP 85

  Fly   100 LIKIVIELPLRSGEIYTLNMLFSGN--------LDRSQQYGYFAGYYDKTPRVFYSATRLEPDYA 156
            | :|.:...|..|:...:.:.:..:        |...|..|      .|.|.:|   ::.:..:.
Zfish    86 L-EITLPFELSRGQHVIVEIEYETSPTATALQWLTPKQTAG------KKHPYLF---SQCQATHC 140

  Fly   157 HTVFPCFDDPRFRTPYNITLVHDRKYVALSNMPPVEEKPYKEIENYVSTTFMGSPPLATQQVMWT 221
            .|:.||.|.|..:..|...:...|:.|||.:.....::|.....:.|...|....|:.:..:...
Zfish   141 RTMVPCQDTPSVKHTYYAQVSVPRELVALMSALRDGQEPDPSDSSRVIYRFRQPVPMPSYLIAIV 205

  Fly   222 LHQLEKVYSGPAAAGENITVWSRPHLAEKLAKVPEMTPNLFSKYETLF--AYPLPKGADWGGKVD 284
            :..||....||.:     .|||.....::.|..       |::.||:.  |..|.....| |:.|
Zfish   206 VGALESREIGPRS-----RVWSEKEYVDEAAYE-------FAETETMLKTAESLAGPYVW-GQYD 257

  Fly   285 HVVLPRYTEMYSG--QGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLVNLEDSDEEYVRN 347
            .:|||. :..|.|  ...:.:....|.:|.   .||...:|..::..|.|.||.....:..::..
Zfish   258 VLVLPP-SFPYGGMENPCLTFVTPTVLAGD---RSLAGVIAHEISHSWTGNLVTNRTWEHFWLNE 318

  Fly   348 GINYYLSVQV-MAMDKE---------AYNTTHLS---------KTRLDVLYHDSLAKVKSIATDV 393
            |...|:...: ..|:.|         .:...|.|         .|.|....|:         .|.
Zfish   319 GHTVYIERMIARCMEGEQLRQFKGIGGWKELHESVKQFGANNVLTNLVPNLHE---------VDT 374

  Fly   394 KESGHQKLRKKKMCLLIHMLKVALGDKLFLKGLQEFFKRYANSSASSKELWEEFQRGARRSHQLP 458
            .|:......:|...||.|:.::..|.::|:..::.:.:.:|..|.:::| |:.:           
Zfish   375 DEAFSSVPYEKGFALLYHLEELMGGPEVFMGFVKSYIQLFAYGSVTTEE-WKNY----------- 427

  Fly   459 TGVSLPTVME------------SWMKQPGFPLLTVQRDD--AKQIVTITQSRYYQKYLDNSS--- 506
                |.|..:            :||..||...:..|.|.  |....::.|.....|..|.:|   
Zfish   428 ----LFTYFKDKVDILNKVDWNAWMHTPGMAPVRPQYDTTMADACTSLCQKWVKAKEADLASFTE 488

  Fly   507 NDCWWVPVAYIVRNLTLPQ-VEW-----------LGCQKNSRDILELSHIANPE---DWLLINVD 556
            .|         |:.|..|| :|:           |...|...::.:|::|.|.|   .||.|.|.
Zfish   489 AD---------VKQLNSPQLIEFMALLLQEDPLPLSHVKKMGEVYKLNNIKNAEVRFRWLRICVK 544

  Fly   557 A----AVPLRVFYDSYNLQLISEALRQDFTQ 583
            |    ||||.       |::.:|..|..||:
Zfish   545 AQWEEAVPLA-------LKMATEQGRMKFTR 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 94/484 (19%)
ERAP1_C 551..929 CDD:288671 13/37 (35%)
lta4hNP_998451.1 leuko_A4_hydro 18..607 CDD:274120 127/616 (21%)
M1_LTA4H 18..449 CDD:189006 91/479 (19%)
Leuk-A4-hydro_C 467..606 CDD:286244 30/118 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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