DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6071 and CG10602

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster


Alignment Length:499 Identity:100/499 - (20%)
Similarity:197/499 - (39%) Gaps:131/499 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 KIVIELP--LRSGEI-----YTLNMLFSGN--LDRSQQYGYFAGYYDKTPRVFYSATRLEPDYAH 157
            |:.:|||  ...|.:     |..:...||.  |:.:|..|      .:.|.:|   ::.:..:|.
  Fly   162 KLTLELPSGTAKGSLNVRIDYETSSSASGLQWLNPTQTLG------KEHPYMF---SQCQAIHAR 217

  Fly   158 TVFPCFDDPRFRTPYNITLVHDRKYVALSNMPPVEEKPYKEIENYVSTTFMGSPPLATQQVMWTL 222
            :|.||.|.|..:..|:.|:.|..:..||.:....:::|.|       |.|....|:....|... 
  Fly   218 SVIPCQDTPAVKFTYDATVEHPSELTALMSALIDKKEPGK-------TLFKQEVPIPAYLVAIA- 274

  Fly   223 HQLEKVYSGPAAAGENITVWSRPHL----AEKLAKVPEMT--------PNLFSKYETLFAYPLPK 275
              :.|:.|.|  .|||.:||:...:    ||:.::...|.        |.::.:|:.|.   :|.
  Fly   275 --IGKLVSRP--LGENSSVWAEEAIVDACAEEFSETATMLKTATELCGPYVWKQYDLLV---MPP 332

  Fly   276 GADWGGKVDHVVLPRYTEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLVNLEDS 340
            ...:|| :::..|...|.      .::.|:          :||.:.:|..:|..|.|.||..::.
  Fly   333 SFPFGG-MENPCLTFVTP------TLLAGD----------KSLADVVAHEIAHSWTGNLVTNKNF 380

  Fly   341 DEEYVRNGINYYLSVQVMAMDKEAYNTTHLSKTRLDVLYHDSLAKVKSIATDVKESGHQKLRK-- 403
            :..::..|...::..:::...:.|        ..||.       |:.|..||::|....:|.|  
  Fly   381 EHFWLNEGFTVFVESKIVGRMQGA--------KELDF-------KMLSNLTDLQECIRTQLNKTP 430

  Fly   404 ------------------------KKMCLLIHMLKVALGDKLFLKGLQEFFKRYANSSASSKE-- 442
                                    |....|.::..:..|..:|...|:::.|:||..|..:|:  
  Fly   431 ELTKLVVDLSNCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQ 495

  Fly   443 --LWEEFQRGARRSHQLPTGVSLPTV-MESWMKQPGFPLLTVQRDDA-----KQIVTITQSRYYQ 499
              |::.|....::.       .|..| .:.|:|..|.|.:....|::     |::.::..|:...
  Fly   496 SALYDYFIDTDKKD-------KLSAVDWDLWLKSEGMPPVIPNFDESLANVTKELASLWSSKSVA 553

  Fly   500 KYLDNSSNDCWWVPVAYIVRNLTLPQ-VEWLGCQKNSRDILELS 542
            :..|:          |.|...:::.| :::||....|:||::|:
  Fly   554 ELADS----------AEIKTTISIHQLIDFLGKLIESKDIVDLN 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 86/426 (20%)
ERAP1_C 551..929 CDD:288671
CG10602NP_609916.5 Ribosomal_L13 16..>50 CDD:294238
leuko_A4_hydro 79..681 CDD:274120 100/499 (20%)
M1_LTA4H 79..520 CDD:189006 83/420 (20%)
Leuk-A4-hydro_C 541..680 CDD:286244 12/57 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462062
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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