DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6071 and Son

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_006248126.1 Gene:Son / 304092 RGDID:1309013 Length:2479 Species:Rattus norvegicus


Alignment Length:180 Identity:43/180 - (23%)
Similarity:76/180 - (42%) Gaps:31/180 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 LISEALRQDFTQIPELSRIQLVDD--ALSLSWSG---RLPYNVTLNVISYLSNETSVLVWETALL 631
            :|||...|....:.|.|..:::|.  |..:..|.   |.|..|....:.|         .::.|.
  Rat   220 VISEQPEQPVPVMLEPSMTKILDSFAAAPVPMSTAVLRSPEPVVTMSVEY---------QKSVLK 275

  Fly   632 NLEKLQSIMRMTTGFRIFKLYMQKLIEPAFKTTLNSLSTKARTGSEI-PINTKSPVTTESSGTTE 695
            :||.:...:..||   :.:|.:.|::||:     .:|:..:.|.:|: |..:.|.:....|.||:
  Rat   276 SLETVPPEISKTT---LVELPIAKVLEPS-----ETLTIVSETPTEVHPEPSPSTMDFPESSTTD 332

  Fly   696 SPDTTESPDTAESPDTTESSNTTESPDTTESSDTTESPDTTKSDLSLSAI 745
            .....|.|..| .|:..:||       .|...::.|.|.||..:|..|::
  Rat   333 VQRLPEQPVEA-PPEIADSS-------MTRPQESLELPKTTAVELQESSV 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352
ERAP1_C 551..929 CDD:288671 43/180 (24%)
SonXP_006248126.1 Forkhead_N 1014..1140 CDD:254796
G-patch 2325..2368 CDD:279867
DSRM 2392..2460 CDD:214634
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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