DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6071 and Rnpep

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_663392.2 Gene:Rnpep / 215615 MGIID:2384902 Length:650 Species:Mus musculus


Alignment Length:349 Identity:68/349 - (19%)
Similarity:134/349 - (38%) Gaps:69/349 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 FPCFDDPRFRTPYNITLVHDRKYVALSNMPPVEEK-PYKEIENYVSTTFMGSPPLATQQVMWTLH 223
            |||||.|..:..|:..:.....:.|:.:....|:: |.|..       |..|.|:.:..:...:.
Mouse   179 FPCFDTPAVKCTYSALIEVPDGFTAVMSADTWEKRGPNKFF-------FQMSHPIPSYLIALAIG 236

  Fly   224 QLEKVYSGPAAAGENITVWSRPHLAEKLAK-----VPEMT--------PNLFSKYETLFAYPLPK 275
            .|.....||.:     .||:.|.|.|...:     :.|..        |.::.:|:.||   :|.
Mouse   237 DLASAEVGPRS-----RVWAEPCLIEAAKEEYSGVIEEFLATGEKLFGPYVWGRYDLLF---MPP 293

  Fly   276 GADWGGKVDHVVLPRYTEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLVNLEDS 340
            ...:|| :::..|...|.      .::.|:          .||.:.:...::..|.|.||...:.
Mouse   294 SFPFGG-MENPCLTFVTP------CLLAGD----------RSLADVIIHEISHSWFGNLVTNANW 341

  Fly   341 DEEYVRNGINYYLSVQVMA-MDKEAYNTTHLSKTRLDVLYHDSLA---------KVK-SIATDVK 394
            .|.::..|...|...::.. :...||.....:..|..:..|.:::         :|| ....|..
Mouse   342 GEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMNVSGEENPLNKLRVKIEPGVDPD 406

  Fly   395 ESGHQKLRKKKMCLLIHMLKVALGDK----LFLKGLQEFFKRYANSSASSKELWEEFQRGARRSH 455
            ::.::...:|..|.:.::..: :||:    .|||...:.||..:..:....|.:.|:....::. 
Mouse   407 DTYNETPYEKGYCFVSYLAHL-VGDQDQFDKFLKAYVDEFKFQSILAEDFLEFYLEYFPELKKK- 469

  Fly   456 QLPTGV-SLPTV-MESWMKQPGFP 477
                || |:|.. .:.|:..||:|
Mouse   470 ----GVDSIPGFEFDRWLNTPGWP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 67/347 (19%)
ERAP1_C 551..929 CDD:288671
RnpepNP_663392.2 leuko_A4_hydro 24..634 CDD:274120 68/349 (19%)
M1_LTA4H 24..484 CDD:189006 65/342 (19%)
Substrate binding. /evidence=ECO:0000250 298..302 2/4 (50%)
Leuk-A4-hydro_C 504..644 CDD:286244
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845899
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.