DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6071 and ltah-1.2

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_500385.1 Gene:ltah-1.2 / 177123 WormBaseID:WBGene00022610 Length:625 Species:Caenorhabditis elegans


Alignment Length:549 Identity:100/549 - (18%)
Similarity:188/549 - (34%) Gaps:164/549 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 KIVIELP---LRSGEIYTLNMLFSGNLD-------RSQQYGYFAGYYDKTPRVFYSATRLEPDYA 156
            |:.:.||   .::|.|..:.:.:..:.|       :.:|..      ||  |:.|..::.:..:|
 Worm    91 KMSVYLPPQFQKAGTILQVTVAYGTSPDATALQWMKKEQTA------DK--RMPYLFSQCQAIHA 147

  Fly   157 HTVFPCFDDPRFRTPYNITLVHDRKYVALSNMPPVEEKPYKEIENYVSTTFMGSPPLA--TQQVM 219
            .::.||.|.|..::.|...:........|.:......|...:     :|||....|:|  :..:.
 Worm   148 RSIVPCMDTPSVKSTYEAEVTVPTGMTCLMSAIGQGSKGDDD-----TTTFFYKQPVAIPSYLIA 207

  Fly   220 WTLHQLEKVYSGPAAAGENITVWSRPHLAEK-----------LAKVPEMTPN-LFSKYETLFAYP 272
            ..:..|||     ....:...||:.|.:.:|           ||...|:... ::.:|:.:.   
 Worm   208 IVVGCLEK-----RDISDRCAVWAEPSVVDKAHWEFAETEDILASAEEIAGKYIWGRYDMVC--- 264

  Fly   273 LPKGADWGGKVDHVVLPRYTEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLVNL 337
            ||....:|| :::..|...|.      .::.|:          .||...:|..:|..|:|.||..
 Worm   265 LPPSFPFGG-MENPCLTFLTP------TLIAGD----------RSLVSVIAHEIAHSWSGNLVTN 312

  Fly   338 EDSDEEYVRNGINYYLS------------VQVMAMD----------KEAYNTTHLSKTRLDVLYH 380
            ...:..::..|...::.            .|.||.:          .|.:..|| ..|:| :..|
 Worm   313 SSWEHFWLNEGFTMFIERKICGRLVSEDYRQFMAFNGWTNSLIPAVYEQFTPTH-QFTKL-IQDH 375

  Fly   381 DSLAKVKSIATDVKESGHQKLRKKKMCLLIHMLKVALGDKLFLKGLQEFFKRYANSSASSKELWE 445
            .::....:.:....|.|        ..||.::.:...|.::|...|:::.|.:|:.:..|.: |:
 Worm   376 TNVDPDVAFSCVPYEKG--------SALLFYLEQKLGGSEIFEAYLKDYLKTFAHQAIDSWQ-WK 431

  Fly   446 E--FQRGARRSHQLPT--------GVSLP---------------TVMESWMKQPGFPLLTVQRDD 485
            :  ::..|.:...|.|        ||.:|               .:::.|:..           |
 Worm   432 DHLYKYFADQKEVLDTVNFDLWFNGVGMPPEKPNYGQSMVEACEVLLKKWLAA-----------D 485

  Fly   486 AKQIVTITQSRYYQKYLDNSSNDCWWVPVAYIVRNLTLPQVEWLGCQKNSRDILEL-SHIANPED 549
            ...:..||...||...                    .|.|:|.|.         :| .|....|.
 Worm   486 ESTVGDITSEDYYAMQ--------------------PLQQIELLS---------QLWQHDPPIEH 521

  Fly   550 WLLINVDAAVPLRVFYDSYNLQLISEALR 578
            :.|   ||...|....||.|.:|:...||
 Worm   522 YKL---DALNKLYKLNDSQNSELLLNWLR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 78/445 (18%)
ERAP1_C 551..929 CDD:288671 10/28 (36%)
ltah-1.2NP_500385.1 M1_LTA4H 12..455 CDD:341062 74/412 (18%)
Leuk-A4-hydro_C 500..614 CDD:378127 17/80 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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