DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6071 and mnp-1

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_497878.1 Gene:mnp-1 / 175564 WormBaseID:WBGene00007139 Length:781 Species:Caenorhabditis elegans


Alignment Length:558 Identity:117/558 - (20%)
Similarity:207/558 - (37%) Gaps:120/558 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKILVLFCTLLSAKLAE--SFVKPLRYNLTILTRLGSEDEQNQFEGIVSIDIEATQPTRVIYLNS 65
            ::.|.:.||...:.|..  |..:|:.|.|.|..|   :..:...||.:.:........:.|.|:|
 Worm   154 IQALPVSCTPSQSPLTSDPSKFQPIHYVLNITIR---DVRKPVLEGHMQLFASTKDQVQAISLHS 215

  Fly    66 LNI--TISRQRTWIYRWASGRKIGALQIKRIIKKTSLIKIVIELPLRSGEIYTLNMLFSGNLDRS 128
            :.|  ..:|.|..:....:|..|   .:.|:.:...||.:.:...:.||    :|:       |.
 Worm   216 VKIHNLENRDRIHVVNCNTGETI---CVSRVHQIDDLIHLELAQSISSG----VNL-------RV 266

  Fly   129 QQYGYFAGYYDKTPRVFYS------------ATRLEPDYAHTVFPCFDDPRFRTPYNITLVHDRK 181
            ...|:.:.  |..|.||..            .:..||..|..|||.||....::.:|:.|.|...
 Worm   267 DIDGFISA--DSGPHVFKQIPTAKWRVPQMIGSVFEPTSARHVFPSFDLHNQKSTFNLCLNHGPS 329

  Fly   182 YVALSNMPPVEEKPYKEIENYVSTT----FMGSPPLATQQVMWTLHQLEKVYSGPAAAGENITVW 242
            ..|::|         ..|...|||:    |..:.||..||:.:.  ..||  :.|..  .|.|..
 Worm   330 MSAIAN---------SLINPNVSTSGISCFEKTVPLIAQQLSFV--AFEK--TNPLF--YNTTTM 379

  Fly   243 SRPHLAEKLAKVPEMTPNLFSKYETL----------------FAYPLPKGADWGGKVDHVVLPRY 291
            ...:|.| :..:..:....|.:||.:                |:|||.       :::.||.| .
 Worm   380 DGAYLPE-IDMIFNLNAKNFKQYEWIHSEVSKVMALMSKWSGFSYPLT-------RLEIVVAP-V 435

  Fly   292 TEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLVNLEDSDEE-----YVRNGINY 351
            ...:|..|::......:...::  .|..|||.:.|..||...:|..|.:..|     ||...||.
 Worm   436 QAGHSALGVITLPAQAIAYQKH--TSTHETLIKEVIGQWMEGVVTTEHTCFEKALIAYVEWKINE 498

  Fly   352 YLSV--QVMAMDKEAYNTTHLSKTRLDVLYHDSLAKVKSIATDVKESGHQKLRKKKMCLLIHMLK 414
            .|.:  :...|:.......:|::|.      ||:..::.|     :|....|...:...:.:.|.
 Worm   499 ELQIVKKTRKMEVSKIRPRNLNETA------DSVRVLRQI-----KSQSSNLCSPRFVEVFYTLD 552

  Fly   415 VALGDKLFLKGLQEFFKRYANSSASSKELW---EEFQRGARRSHQLPTGVSLPTVMESWMKQPGF 476
            ...|.:..:..::..|.::|.|:|:..: |   .|...|.|     |...:|   :..|.:    
 Worm   553 ETYGQETVIGMIRVIFDKFAFSTATISD-WASAAETATGGR-----PEAGAL---IHQWYR---- 604

  Fly   477 PLLTVQRDDAKQIVTITQSRYYQKYLDNSSNDCWWVPV 514
            |..|:.|...:.:|:.....:.|     .:.:.|.||:
 Worm   605 PSSTISRPVLRAVVSSNSVEFNQ-----LTEETWTVPL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 103/495 (21%)
ERAP1_C 551..929 CDD:288671
mnp-1NP_497878.1 Peptidase_M1 172..556 CDD:279741 93/439 (21%)
GluZincin <294..>480 CDD:301352 49/211 (23%)
GluZincin <547..602 CDD:301352 12/63 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11533
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.