DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6071 and COL4A6

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_006724680.1 Gene:COL4A6 / 1288 HGNCID:2208 Length:1708 Species:Homo sapiens


Alignment Length:24 Identity:9/24 - (37%)
Similarity:14/24 - (58%) Gaps:0/24 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 GVSLPTVMESWMKQPGFPLLTVQR 483
            |:|||:::......||.|.|..:|
Human  1264 GISLPSLIAGQPGDPGRPGLDGER 1287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 6/16 (38%)
ERAP1_C 551..929 CDD:288671
COL4A6XP_006724680.1 Collagen 359..416 CDD:189968
Collagen 681..740 CDD:189968
Collagen 800..859 CDD:189968
Collagen 905..964 CDD:189968
Collagen 1029..1088 CDD:189968
Collagen 1150..1208 CDD:189968
C4 1485..1589 CDD:279721
C4 1593..1705 CDD:279721
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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