DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6071 and uba3

DIOPT Version :9

Sequence 1:NP_648488.1 Gene:CG6071 / 39308 FlyBaseID:FBgn0036186 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_012815865.1 Gene:uba3 / 100124303 XenbaseID:XB-GENE-947291 Length:462 Species:Xenopus tropicalis


Alignment Length:504 Identity:96/504 - (19%)
Similarity:158/504 - (31%) Gaps:178/504 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 DWGGKVDHVVLPRYTEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWN---GLLVNLED 339
            ||.|:.:||  .::.|.   .|...:.|  .:.....|:.|.||...||.....   .||.||  
 Frog    32 DWEGRWNHV--KKFLER---SGPFTHPE--FEPSNESLQFLLETCKILVVGAGGLGCELLKNL-- 87

  Fly   340 SDEEYVRNGINYYLSVQVMAMDKEAYNTTHLSKTRLDVLYHDSLAKVKSIATDVKESGHQK---- 400
                    .::.:..:.|:.||     |..:|......|:..            |:.|..|    
 Frog    88 --------ALSGFRQIHVIDMD-----TIDVSNLNRQFLFRP------------KDVGRPKAEVA 127

  Fly   401 -----LRKKKMCLLIHMLKVALGDKLFLK-------GLQEFF-KRYANSSASSKELWEE--FQR- 449
                 .|....|:..|..|:...|:.|.:       ||.... :|:.|....|...:|:  .|: 
 Frog   128 AEFINTRIPDCCVTPHFTKIQDFDETFYREFHIIVCGLDSIIARRWLNGMLMSLLNYEDGVLQQS 192

  Fly   450 -------GARRSHQLPTGVSLP-------TVMESWMKQPGFPLLTVQRDDAKQIVTITQSRYYQK 500
                   |.....:..:.|.||       ..:|.:..|..||:.|:..                 
 Frog   193 TVIPLIDGGTEGFKGNSRVILPGMTACVECTLELYPPQINFPMCTIAS----------------- 240

  Fly   501 YLDNSSNDCWWVPVAYIVRNLTLPQVEWL--GCQKNSRDILELSHIANPE--DWLLIN-VDAAVP 560
             :......|    :.| ||.|..|:.:..  |.|.:..|         ||  .|:.:| ::.|..
 Frog   241 -MPRLPEHC----IEY-VRILQWPKEQPFGEGVQLDGDD---------PEHIQWIFMNSLERAKQ 290

  Fly   561 LRVFYDSYNL----------------QLISEALRQDFTQIPELSRIQL--------VDDALSLSW 601
            ..:...:|.|                .:|:.|...:..:|...:.|.|        ||...:.::
 Frog   291 FNIRGVTYRLTQGVVKRIIPAVASTNAVIAAACATEVFKIATSAYIPLNNYLVFNDVDGLYTYTF 355

  Fly   602 S----------GRLPYNVTL-------NVISYLSNETSVLVWETAL----------LNLEKLQSI 639
            .          .:||.|:..       .|:.||:|:||:.:...|:          |.|:.:.||
 Frog   356 EAEKKENCPACSQLPQNIQFPSSAKLQEVLDYLTNDTSLQMKSPAITATLDGKNKTLYLQTVASI 420

  Fly   640 MRMTTGFRIFKLYMQKLIEPAFKTTLNSLSTKARTGSEIPINTKSPVTT 688
            ...|              .|....||..|...  .|.|:.:   :.|||
 Frog   421 EERT--------------RPNLCKTLKELGLV--DGQELAV---ADVTT 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6071NP_648488.1 GluZincin 25..477 CDD:301352 46/235 (20%)
ERAP1_C 551..929 CDD:288671 35/190 (18%)
uba3XP_012815865.1 Uba3_RUB 70..367 CDD:238765 60/355 (17%)
E2_bind 375..460 CDD:370142 21/95 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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