DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCID2 and pcid2

DIOPT Version :9

Sequence 1:NP_648486.1 Gene:PCID2 / 39306 FlyBaseID:FBgn0036184 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001016590.1 Gene:pcid2 / 549344 XenbaseID:XB-GENE-964456 Length:399 Species:Xenopus tropicalis


Alignment Length:395 Identity:194/395 - (49%)
Similarity:272/395 - (68%) Gaps:7/395 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVDRFLKPPLDEVVSAHLKVL 68
            |:|.||..|..|....:|.:.|..:|.|..||.|..|.::.||:...:.|:||.||:.:|||:.:
 Frog     5 TINQYLQQVQEAIDSKNGYNCADLVSFRHPHVANARLQLSSPEEKCQQVLEPPYDEMFAAHLRCI 69

  Fly    69 YHLAQEPPGYMEAYTQQSAACGAVVRLLQQLKDENWCLPLMYRVCLDLRYLA----QACEKHCQG 129
            ..::..  .::|||..|:....:.::..|..|:|||.||:||.:.||||..|    |...|..:|
 Frog    70 NAVSNH--DFVEAYKYQTLVVQSFLKSFQAHKEENWALPIMYSITLDLRIFANNADQQLVKKGKG 132

  Fly   130 FTPGHVLEKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLIRAID 194
             ..|.:|||||:.:|:||||||:|.|||.||:|:.||:.||||||||||:|:|||||||||||||
 Frog   133 -KVGDMLEKAAELLMSCFRVCASDTRASFEDSKKWGMLFLVNQLFKIYFKISKLHLCKPLIRAID 196

  Fly   195 NCIFKDSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLILIYLVPVKML 259
            :..||:.:.:.:::||||:|||::||||:::.|.:|||:||.:|......|||:|||||:|||||
 Frog   197 SSNFKEEYTMAQRVTYKYYVGRKSMFDSDFKKAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKML 261

  Fly   260 LGYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQELVLIRSGIYLLVEKLKFLVYRNLF 324
            ||::|:..||::|||:.|.::..|:..||:....|.:...|...||.||:|::|.||.:.|||||
 Frog   262 LGHMPAIQLLKKYDLMQFAEVTKAVSEGNLLLLTEALSKHETFFIRCGIFLILENLKIISYRNLF 326

  Fly   325 KKVFVIRKSHQLDMGDFLSALHFVGLTDVSLDETHCIVANLIYDGKIKGYISHAHNKLVVSKQNP 389
            |||:::.|:|||.:..||.||.|:.:.|:.|.|..||:|||||.|.|||||||.|.|||||||||
 Frog   327 KKVYLLLKTHQLSLDAFLVALKFMEVEDIDLAEVQCIIANLIYMGHIKGYISHQHQKLVVSKQNP 391

  Fly   390 FPSVS 394
            ||.:|
 Frog   392 FPPLS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCID2NP_648486.1 PCI <136..391 CDD:295179 145/254 (57%)
pcid2NP_001016590.1 PCI 70..393 CDD:382849 167/325 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 260 1.000 Domainoid score I1939
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10168
Inparanoid 1 1.050 382 1.000 Inparanoid score I2004
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D349064at33208
OrthoFinder 1 1.000 - - FOG0004189
OrthoInspector 1 1.000 - - oto102405
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4571
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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