DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCID2 and Pcid2

DIOPT Version :9

Sequence 1:NP_648486.1 Gene:PCID2 / 39306 FlyBaseID:FBgn0036184 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_848823.2 Gene:Pcid2 / 234069 MGIID:2443003 Length:399 Species:Mus musculus


Alignment Length:394 Identity:200/394 - (50%)
Similarity:271/394 - (68%) Gaps:5/394 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVDRFLKPPLDEVVSAHLKVL 68
            |:|.||..|..|....||.|.|..:|.:..||.|..|.:|.||:...:.|:||.||:.:|||:..
Mouse     5 TINQYLQQVYEAIDTRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDEMFAAHLRCT 69

  Fly    69 YHLAQEPPGYMEAYTQQSAACGAVVRLLQQLKDENWCLPLMYRVCLDLRYLAQACEKHC--QGFT 131
            |.:...  .::|||..|:....:.:|..|..|:|||.||:||.|.||||..|...::..  :|.:
Mouse    70 YAVGNH--DFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQLVKKGKS 132

  Fly   132 P-GHVLEKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLIRAIDN 195
            . |.:|||||:.:|:||||||:|.||..||:|:.||:.||||||||||:|||||||||||||||:
Mouse   133 KVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDS 197

  Fly   196 CIFKDSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLILIYLVPVKMLL 260
            ...||.:...::|||||:|||:|||||:::.|.:|||:||.:|......|||:|||||:||||||
Mouse   198 SNLKDDYSTAQRITYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLL 262

  Fly   261 GYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQELVLIRSGIYLLVEKLKFLVYRNLFK 325
            |::|:..||::|.|:.|.::..|:..||:...:|.:...|...||.||:|::||||.:.||||||
Mouse   263 GHMPTIELLRKYHLMQFSEVTKAVSEGNLLLLNEALAKHETFFIRCGIFLILEKLKIITYRNLFK 327

  Fly   326 KVFVIRKSHQLDMGDFLSALHFVGLTDVSLDETHCIVANLIYDGKIKGYISHAHNKLVVSKQNPF 390
            ||:::.|:|||.:..||.||.|:.:.||.:||..||:|||||.|.|||||||.|.||||||||||
Mouse   328 KVYLLLKTHQLSLDAFLVALKFMHVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPF 392

  Fly   391 PSVS 394
            |.:|
Mouse   393 PPLS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCID2NP_648486.1 PCI <136..391 CDD:295179 148/254 (58%)
Pcid2NP_848823.2 PCI 80..393 CDD:382849 169/312 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833478
Domainoid 1 1.000 264 1.000 Domainoid score I1910
eggNOG 1 0.900 - - E1_COG5600
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10168
Inparanoid 1 1.050 391 1.000 Inparanoid score I1972
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54456
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004189
OrthoInspector 1 1.000 - - oto92099
orthoMCL 1 0.900 - - OOG6_101860
Panther 1 1.100 - - LDO PTHR12732
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R253
SonicParanoid 1 1.000 - - X4571
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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