DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PCID2 and C27F2.10

DIOPT Version :10

Sequence 1:NP_648486.1 Gene:PCID2 / 39306 FlyBaseID:FBgn0036184 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_498057.1 Gene:C27F2.10 / 175675 WormBaseID:WBGene00016171 Length:413 Species:Caenorhabditis elegans


Alignment Length:412 Identity:176/412 - (42%)
Similarity:246/412 - (59%) Gaps:33/412 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FGTVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVDRFLK------PPLDEV 60
            ||.:.:    :|:.....:||.::.::|..|.|.|...::|   |....|..:      ...||:
 Worm    11 FGQIES----LLYRQDWTNGEKISKFVSTYDEHAQEPFMHI---EAYGSRSKRCRVSEDEVFDEI 68

  Fly    61 VSAHLKVLY--HLAQEPPGYMEAYTQQSAACGAV----VRLLQQLKDENWCLPLMYRVCLDLRYL 119
            |..||.|||  |:||      :..|.||.....:    ..:||:.|||||.||:.||:|.|||:|
 Worm    69 VCLHLHVLYNIHVAQ------DLITAQSTQIQIIQLFNKEILQKRKDENWFLPIFYRLCTDLRWL 127

  Fly   120 AQACEKHCQGFTPG-----HVLEKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFR 179
            ::..|....|...|     ...|.||..|..|:|.|.:|..|.|..||::.|:|:.||||:|||:
 Worm   128 SKGAEACVSGDDEGDSNANSFFESAAKAITECYRTCVSDVHAEEGTTKKVAMLNMTNQLFQIYFQ 192

  Fly   180 INKLHLCKPLIRAIDNC--IFKDSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRF 242
            ||||:|.||||||||||  ::.| |.:.:::.|.||:||:||||::...|.:.|.|||.|||...
 Worm   193 INKLNLLKPLIRAIDNCGSLYHD-FLMSDKVAYNYFLGRKAMFDADLNLAEKSLLYAFRNCPADS 256

  Fly   243 ASNKRLILIYLVPVKMLLGYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQELVLIRSG 307
            .||||.|||||:||||.||::|:..||..|.|..|.|:...:|.||:.:.|..:...|...|:.|
 Worm   257 MSNKRKILIYLIPVKMFLGHMPTSQLLHEYRLDEFQDVVAGVKDGNLAQLDGALAANEAFFIKCG 321

  Fly   308 IYLLVEKLKFLVYRNLFKKVFVIRKSHQLDMGDFLSALHFVGLTDVSLDETHCIVANLIYDGKIK 372
            |:|::|||:.:.:|.|||||..|..:.|:.:..|.:||.|||:|||.:||..||:||||...|||
 Worm   322 IFLMLEKLRMITFRTLFKKVSQIVGTAQIPLDAFQTALRFVGVTDVDMDELECIIANLIASKKIK 386

  Fly   373 GYISHAHNKLVVSKQNPFPSVS 394
            ||:||.|.|||:||.|.||::|
 Worm   387 GYLSHQHQKLVISKMNAFPTLS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCID2NP_648486.1 PINT <136..391 CDD:470471 128/256 (50%)
C27F2.10NP_498057.1 PINT 66..405 CDD:470471 161/345 (47%)

Return to query results.
Submit another query.