DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6083 and kcnab1

DIOPT Version :10

Sequence 1:NP_648485.1 Gene:CG6083 / 39305 FlyBaseID:FBgn0036183 Length:322 Species:Drosophila melanogaster
Sequence 2:XP_012818504.1 Gene:kcnab1 / 549740 XenbaseID:XB-GENE-950688 Length:429 Species:Xenopus tropicalis


Alignment Length:335 Identity:78/335 - (23%)
Similarity:128/335 - (38%) Gaps:76/335 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NGKNMPMLGLGTW-----RSPPEVVTQAVKDAIDIGYRHFDCAHIY-GNEAQV--GAALREKMDE 66
            :|..:..||||||     :...||..|.:..|.:.|...||.|.:| ..:|::  |..:|:|.  
 Frog   107 SGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYENGVNLFDTAEVYAAGKAEIILGNIIRKKN-- 169

  Fly    67 GVVTRDELFITSKL-WNTHHKPDLVRPACETSIRNLGVKY----LNLYLMHWPMAYKSGSDNLYP 126
              ..|..|.||:|| |.         ...||. |.|..|:    |...|....:.|   .|.::.
 Frog   170 --WRRSSLVITTKLYWG---------GKAETE-RGLSRKHIIEGLKASLQRMQLEY---VDVVFA 219

  Fly   127 TCPDTNKAAFEDIDYVDTWRAMENLVDEGLCQAIGVSNFNEQQMNRLLSVAK----LKPVVLQIE 187
            ..||.|....|.:      |||..::::|:....|.|.::..::....|||:    :.||..|.|
 Frog   220 NRPDNNTPMEEIV------RAMSYVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAE 278

  Fly   188 CHPYLSQK---PLITLCYDNAIAVTAYSCLGSG--HTPYE-----------------------KP 224
            .|.:..:|   .|..|.:...:....:|.|..|  ...||                       :.
 Frog   279 YHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYENGVPESTRASLKCYQWLKDKILSEE 343

  Fly   225 GAYPLLQHPTILAIAEKYERTAAQV----LLRFQTQSGIIVIPRSVSKQHMLDNFKRIWDFELAV 285
            |.....:...::.|||:...|..|:    .||.:..|.:::  .|.:.:.:::|...|.......
 Frog   344 GRKQRTKLRDLMPIAERLGCTLPQLAVAWCLRNEGVSSVLL--GSSNPEQLIENLGAIQVLPKMT 406

  Fly   286 DDIQAINELD 295
            ..|  :||:|
 Frog   407 SHI--VNEVD 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6083NP_648485.1 AKR_SF 4..299 CDD:444925 78/335 (23%)
kcnab1XP_012818504.1 AKR_KCAB1B_AKR6A3-like 99..421 CDD:381385 78/335 (23%)

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