DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Duba and OTUD6B

DIOPT Version :10

Sequence 1:NP_648482.3 Gene:Duba / 39302 FlyBaseID:FBgn0036180 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_057107.4 Gene:OTUD6B / 51633 HGNCID:24281 Length:293 Species:Homo sapiens


Alignment Length:314 Identity:71/314 - (22%)
Similarity:116/314 - (36%) Gaps:85/314 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 DELARTHRCSPH--------------KSTRSKRREHHEAHAHLYK------RDRLEREKLVHPTA 108
            ::|.|.||....              |:.:.:|::..|..|.|.|      |:.||:.||.....
Human    13 EQLLRRHRKEKKELQAKIQGMKNAVPKNDKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTTKEN 77

  Fly   109 AAGSGAPGVSGSKC-NSPP--STSTSGSSSPSAVGRNSPEHLGLGCTTVPTAQVQMSTSTAAANL 170
            ...|.|..:|.... |.||  |.:.......:|:.:...|.:         |:.::...|.|   
Human    78 KIDSVAVNISNLVLENQPPRISKAQKRREKKAALEKEREERI---------AEAEIENLTGA--- 130

  Fly   171 LKTVEETFSGYNSGDEHHQPKERLIPVEEWQRRDLEFAKCMEQRGYELKPVEEDGACLFRSISLQ 235
                            .|...|:|             |:.:..|..|:|.:..||.|::::|..|
Human   131 ----------------RHMESEKL-------------AQILAARQLEIKQIPSDGHCMYKAIEDQ 166

  Fly   236 IYGDEEMHDVI--RQHTMDYIHENREYFGQFVT----------EDINSYIQRKRARDAHGNHIEI 288
            :...:....|:  |..|.:|:..:.|.|..|:|          |:...|.:......|.|..:|:
Human   167 LKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLEL 231

  Fly   289 QAISEIYSRTVEVYCYQSNPINIFNSEQSQAGYPPLRLSYQR-----GSHYNAI 337
            :|:|.|....:|:....|.|| |...|.|:   .||.|.|.|     |.|||::
Human   232 RALSHILQTPIEIIQADSPPI-IVGEEYSK---KPLILVYMRHAYGLGEHYNSV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DubaNP_648482.3 OTU_OTUD5-like 215..339 CDD:438589 39/140 (28%)
PTZ00449 <432..>634 CDD:185628
OTUD6BNP_057107.4 OTU_OTUD6 138..282 CDD:438598 42/161 (26%)
Cys-loop. /evidence=ECO:0000250 152..158 2/5 (40%)
Variable-loop. /evidence=ECO:0000250 219..229 2/9 (22%)
His-loop. /evidence=ECO:0000250 267..277 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.