DRSC/TRiP Functional Genomics Resources

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Protein Alignment Duba and OTUD1

DIOPT Version :10

Sequence 1:NP_648482.3 Gene:Duba / 39302 FlyBaseID:FBgn0036180 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_001138845.1 Gene:OTUD1 / 220213 HGNCID:27346 Length:481 Species:Homo sapiens


Alignment Length:408 Identity:81/408 - (19%)
Similarity:135/408 - (33%) Gaps:134/408 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PQRRGE---VYDELARTHRCSPHKSTRSKRREHHEAHAHLYK-RDRLEREKLVHPTAAAGSGAPG 116
            |.|||.   :.:||.|.. | |..:.....||..:.:..|.: |..|...|...|.|..||..||
Human   158 PPRRGSSAWLLEELLRPD-C-PEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPG 220

  Fly   117 V------------------SGSKCNSPPSTSTSGSSSPSAVGRNSPEHLGLGCTTVPTAQVQMST 163
            .                  .|.:|::|         ...|..|..||     ....|...::.:.
Human   221 PGPWGEEHLAERGPRGWERGGDRCDAP---------GGDAARRPDPE-----AEAPPAGSIEAAP 271

  Fly   164 STAAANLLKTVEETFSGYNSGDEHHQPKERLIP--VEEWQRRDLEFAKCMEQRGYELKPVEEDGA 226
            |:||..::.:             ...|::..:.  :.|.:::|    |.:.||......:..||.
Human   272 SSAAEPVIVS-------------RSDPRDEKLALYLAEVEKQD----KYLRQRNKYRFHIIPDGN 319

  Fly   227 CLFRSISLQIYGDEEMHDVIRQHTMDYIHENREYFGQFVTEDINSYIQRKRARDAHGNHIEIQAI 291
            ||:|::|..:|||:.:|..:|:.|:.||.::.::|...:..|:..:|.......|...:.|:.|:
Human   320 CLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLAM 384

  Fly   292 SE-------------IYSRTVEVYCYQSNPINIFNSEQSQAGYPPLRLSYQRGSHYNAILDPYNA 343
            .:             :.|.||      |..|:....|.|..  |.:.||:....||:|:.|    
Human   385 GQMLNVNIHLTTGGRLESPTV------STMIHYLGPEDSLR--PSIWLSWLSNGHYDAVFD---- 437

  Fly   344 TVGVGLGLAGYKPEIQTKEAVRLSEQLEIEQTMFEDKLKTTDWEATNEAIEEQIARESYLQWCRE 408
                                                               .......|..||::
Human   438 ---------------------------------------------------HSYPNPEYDNWCKQ 451

  Fly   409 -NTQRSRNSNTAAGSATS 425
             ..||.|:...|...|.|
Human   452 TQVQRKRDEELAKSMAIS 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DubaNP_648482.3 OTU_OTUD5-like 215..339 CDD:438589 33/136 (24%)
PTZ00449 <432..>634 CDD:185628
OTUD1NP_001138845.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..60
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..282 19/106 (18%)
OTU_OTUD1 289..437 CDD:438584 38/159 (24%)
Cys-loop. /evidence=ECO:0000305|PubMed:23827681 314..320 2/5 (40%)
His-loop. /evidence=ECO:0000305|PubMed:23827681 369..379 1/9 (11%)
Variable-loop. /evidence=ECO:0000305|PubMed:23827681 426..431 0/4 (0%)
Blue background indicates that the domain is not in the aligned region.

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