DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG7368 and NUC

DIOPT Version :9

Sequence 1:	NP_001036599.1	Gene:	CG7368 / 39301	FlyBaseID:	FBgn0036179	Length:	530	Species:	Drosophila melanogaster
Sequence 2:	NP_199229.1	Gene:	NUC / 834439	AraportID:	AT5G44160	Length:	466	Species:	Arabidopsis thaliana

Alignment Length:	279	Identity:	57/279 - (20%)
Similarity:	96/279 - (34%)	Gaps:	61/279 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   285 TTAGGSGATSGKKKKRKKRSKDRKTKLRPGEIRLGTALDGSPLYMCPECHVAYPEPELLEVHLVG 349
            |.:.|||....:........   ::.:.|..::....|.|:|   .||..|....|..|..
plant     8 TISSGSGFAQPQSSSTLDHD---ESLINPPLVKKKRNLPGNP---DPEAEVIALSPTTLMA---- 62

  Fly   350 HNLEKRYVCDICQASLKRKDHLTRHKQSHN-------------PERPYIC--TVCL-----KAFK 394
               ..|::|::|....:|..:|..|::.||             .:|.|:|  ..|:     :|..
plant    63 ---TNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALG 124

  Fly   395 RKEQLSLHFVIHSGEKRHQCGECGKGFYRKDHLRKHTRSHIARRVKAELNSHVRRENG----TSM 455
            ....:..||....|||:..|.:|.|.:..:...:.|:::...|..:.:..:...|.:.    .:.
plant   125 DLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAF 189

  Fly   456 LQPVVTE-ATTAALQHANQLASA----QQQLQQQQQQ-------QQQQQQQQQQQQQHH------ 502
            ...:..| |...|:.|.|.||:|    ...|..|...       |....|.|.....||
plant   190 CDALAEETAKINAVSHLNGLAAAGAPGSVNLNYQYLMGTFIPPLQPFVPQPQTNPNHHHQHFQPP 254

  Fly   503 ------IVITQQQATPQQQ 515
                  :.:.|..|.||.|
plant   255 TSSSLSLWMGQDIAPPQPQ 273

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG7368	NP_001036599.1	C2H2 Zn finger	330..350	CDD:275368	5/19 (26%)
		COG5048	356..>412	CDD:227381	17/75 (23%)
		C2H2 Zn finger	358..378	CDD:275368	5/19 (26%)
		zf-H2C2_2	370..395	CDD:290200	9/44 (20%)
		C2H2 Zn finger	386..406	CDD:275368	5/26 (19%)
		zf-H2C2_2	399..423	CDD:290200	8/23 (35%)
		zf-C2H2	412..434	CDD:278523	4/21 (19%)
		C2H2 Zn finger	414..434	CDD:275368	4/19 (21%)
NUC	NP_199229.1	C2H2 Zn finger	68..88	CDD:275368	5/19 (26%)
		C2H2 Zn finger	109..137	CDD:275368	5/27 (19%)
		C2H2 Zn finger	144..163	CDD:275368	4/18 (22%)
		C2H2 Zn finger	171..187	CDD:275368	1/15 (7%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	44	1.000	Inparanoid score	I2683
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.960