DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7368 and l(3)neo38

DIOPT Version :9

Sequence 1:NP_001036599.1 Gene:CG7368 / 39301 FlyBaseID:FBgn0036179 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster


Alignment Length:490 Identity:186/490 - (37%)
Similarity:252/490 - (51%) Gaps:100/490 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNFTPFGNTFPGNIPGLPQFTTSTAPLVSTVTAAVTDVTVTGTNNPQQQQQQDAAGSSNRYQQQQ 65
            |||:.||..|.|......:|...|.....|..||..:......          |||:.|..|:.|
  Fly     2 MNFSAFGGPFSGIHQFAAKFDAQTPGAFGTPPAAAANAAAAAA----------AAGTDNHVQRYQ 56

  Fly    66 QQVTHFGQATMTAGQGSSGNKFRGGQDDAI-----QGDKYNGHLVASSQQQQQQQQQQQTQYATV 125
            ....||.|.....   |:.|..:.||:.:|     |||                          :
  Fly    57 TNGNHFNQNVPNV---SAANNMQYGQNISIPYSQPQGD--------------------------L 92

  Fly   126 AYASATATSAATDALQAGTSGQQQQQQQMQQQQVTAPQELTQDLCNAILQQQVLQNT--SWQTLT 188
            .:.:|.|.        |...|:...:.:..:::|              |.||:|||.  |||||.
  Fly    93 NFLNAAAA--------ADHKGKIHPKIERDREEV--------------LNQQILQNVNQSWQTLA 135

  Fly   189 PGTTVADYLSHLPANTLPLSLHHFLKYSAETIKKENQQNVVLQ-----------VQTGPA----- 237
            ......||.|||.:.|||:|:.|||||| ||||||:..:|:..           |...|:     
  Fly   136 NTANTVDYSSHLLSATLPISIQHFLKYS-ETIKKESTGDVLKNGTNLASLALGGVALTPSNNGAN 199

  Fly   238 -------IGINTLGTTTISIPQQAEQLT------LQPQQQATLQVQTQAAVTATATTATATTAGG 289
                   :|::..|..|.........||      :......|:......||:::.:..|...:||
  Fly   200 GGHHNGLVGMDHGGHMTNMTDANGAALTNGASNGVNGNANGTVTNGGAGAVSSSGSVGTTNASGG 264

  Fly   290 SGATSGKKKKRKKRSKDRKTKLRPGEIRLGTALDGSPLYMCPECHVAYPEPELLEVHLVGHNLEK 354
            :|..||||.|:||..|::|.:.:|||||...|||||.||.||||.:|||:..|:|.|::.|.:|:
  Fly   265 TGTASGKKTKKKKPPKEKKPRPKPGEIRETKALDGSTLYCCPECQMAYPDRSLIEQHVISHAVER 329

  Fly   355 RYVCDICQASLKRKDHLTRHKQSHNPERPYICTVCLKAFKRKEQLSLHFVIHSGEKRHQCGECGK 419
            |:|||||.|:|||||||||||.||.|:||::|.:|:|:|||||||:||.|||||||:|.|.||||
  Fly   330 RFVCDICNAALKRKDHLTRHKLSHIPDRPHVCNICMKSFKRKEQLTLHIVIHSGEKKHVCIECGK 394

  Fly   420 GFYRKDHLRKHTRSHIARRVKAELNSHVRRENGTS 454
            |||||||||||||||||||||:|:::  :..||::
  Fly   395 GFYRKDHLRKHTRSHIARRVKSEVSA--QNVNGSA 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7368NP_001036599.1 C2H2 Zn finger 330..350 CDD:275368 10/19 (53%)
COG5048 356..>412 CDD:227381 41/55 (75%)
C2H2 Zn finger 358..378 CDD:275368 16/19 (84%)
zf-H2C2_2 370..395 CDD:290200 15/24 (63%)
C2H2 Zn finger 386..406 CDD:275368 13/19 (68%)
zf-H2C2_2 399..423 CDD:290200 18/23 (78%)
zf-C2H2 412..434 CDD:278523 19/21 (90%)
C2H2 Zn finger 414..434 CDD:275368 18/19 (95%)
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368 10/19 (53%)
zf-C2H2_8 306..391 CDD:292531 55/84 (65%)
C2H2 Zn finger 333..353 CDD:275368 16/19 (84%)
zf-H2C2_2 345..370 CDD:290200 15/24 (63%)
C2H2 Zn finger 361..381 CDD:275368 13/19 (68%)
zf-H2C2_2 374..398 CDD:290200 18/23 (78%)
C2H2 Zn finger 389..409 CDD:275368 18/19 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BP5H
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2683
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D427352at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.870

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