DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7368 and Prdm13

DIOPT Version :10

Sequence 1:NP_001036599.1 Gene:CG7368 / 39301 FlyBaseID:FBgn0036179 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_648032.1 Gene:Prdm13 / 38713 FlyBaseID:FBgn0035687 Length:465 Species:Drosophila melanogaster


Alignment Length:388 Identity:72/388 - (18%)
Similarity:116/388 - (29%) Gaps:166/388 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 QQVLQNTSWQTLTP-GTTVADYLSHLPANTLPLSLHHFLKYSAETIKKENQQNVVLQVQTGPAIG 239
            :|:|.:||   :|| ..|.:...:.|.|.|          .:|...|:....|        |..|
  Fly    23 EQLLPSTS---ITPTSMTTSSTETTLTATT----------STASPAKRMRMSN--------PRPG 66

  Fly   240 INTLGTTTISIPQQAEQLTLQPQQQATLQVQTQAAVTAT-----ATTATATTAGGSGATSGKKKK 299
            :            .|.|.|  |:...::.:.|.|.:.:|     .:.:....:.|....||...:
  Fly    67 V------------YASQYT--PKDTCSMAIPTSALLGSTVMPTDGSRSHCQLSNGELIVSGSLLR 117

  Fly   300 RKKRSKDRKT-----KLRPGEIRLGTALD------------------------------GSPLYM 329
            :.|.|:|..:     :|..|::|:....|                              |:..||
  Fly   118 QIKLSEDVYSFNAIFELHGGQVRVRLVRDVAREDEIVAWFGEELVLLMGIPFLTPLNIQGNSRYM 182

  Fly   330 CPECHVAYPEPELLEVHL-VGHNLEKRYVCDICQASL-------KRKDHLTRH------------ 374
            |..||:.:..|..|::|| :|..   |...||....|       .|....|:|            
  Fly   183 CHLCHLTFETPHPLKIHLALGCG---RSAMDILWMRLHYALKAAARSHTETQHSPIPATSSTSSA 244

  Fly   375 KQSHNPE----------RP---------------------------------------------- 383
            ..:|:|.          ||                                              
  Fly   245 SPTHSPPPQMPPRFSAFRPIAALTQSLPMVPVTTAATPLSYLPSMSMATAPLSTNPMNAAAQIEA 309

  Fly   384 -----------YICTVCLKAFKRKEQLSLHFVIHSGEKRHQCGECGKGFYRKDHLRKHTRSHI 435
                       ::|..|.|.:.||..|.:|...|:|.|..:|..|.:.|....:|.||.|.|:
  Fly   310 IVSNMGASKQGHLCIYCGKVYSRKYGLKIHIRTHTGFKPLKCKFCLRPFGDPSNLNKHVRLHL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7368NP_001036599.1 C2H2 Zn finger 330..350 CDD:275368 7/20 (35%)
COG5048 356..>412 CDD:227381 20/141 (14%)
C2H2 Zn finger 358..378 CDD:275368 6/38 (16%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2 412..434 CDD:395048 7/21 (33%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
Prdm13NP_648032.1 KREPA <250..>352 CDD:483960 13/101 (13%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-C2H2 406..427 CDD:395048
C2H2 Zn finger 408..427 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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