Protein Alignment rt and pomt1

DIOPT Version :10

• Sequence 1: NP_524025.2
• Gene: rt / 39297
• FlyBaseID: FBgn0003292
• Length: 886
• Species: Drosophila melanogaster
• Sequence 2: NP_001041532.2
• Gene: pomt1 / 569769
• ZFINID: ZDB-GENE-060929-966
• Length: 720
• Species: Danio rerio
• Alignment Length: 730
• Identity: 321/730 - (43%)
• Similarity: 460/730 - (63%)
• Gaps: 31/730 - (4%)

  Fly   166 PFTVNLRIDLFSWTLFLLAFGTRFYKLATPPHIVFDELHYGKYISMYMRNIFFFDQH-PPLGKQL 229
            |.:|.:.|::....:..||..||.|.:..|..:||||::||:::|:||:.:||.|:. ||.|..:
Zfish     7 PVSVTVEINVLLLAVTALALFTRLYGIHFPKAVVFDEVYYGQFLSLYMKQVFFIDESGPPFGHMI 71

  Fly   230 IAGLVSLAGYDGNYTFTRIGEPYSPEMPIFWFRFLPAMCGSLLAPAVYNLLLEAKLSRWSSALGG 294
            :|....|.|:|||:.:.|||..|...:|::..|.:||:.||...|..|.:::|...|.: ||||.
Zfish    72 LALGAYLGGFDGNFVWNRIGAEYPGNVPVWSLRLIPALAGSFCVPLAYLVVVELGYSHF-SALGA 135

  Fly   295 -LLVVLDNSLLTQSRFVLMESMLLLATTVGIACLLRFQRSRLGSLEWFFTGTAAAVCLGAAGTVK 358
             .|:::::||:.||||:|:||:|:....:.:...|||.::|..|.:||:.......|....| ||
Zfish   136 CALLLMEDSLIVQSRFMLLESVLIFFLLLAVLSYLRFHKARNSSFKWFWLVICGVSCAFGIG-VK 199

  Fly   359 YVGFLALGLAFYLLCRHLWQLLYDAGLTDRQLWMHAISRLLIFVGIPLAVYLGVFYIHFKTLHRA 423
            |:|.....|.......|.|||:.|..|:..::..|.:.|.|..|.:|:.:|||.||||...|:|:
Zfish   200 YMGMFTYFLLLSQAAVHTWQLIGDRTLSHGKVMFHVLVRFLALVVLPVIMYLGFFYIHLTLLYRS 264

  Fly   424 GPHDSIMTSAFQASLDGGLASITKGQPLAVVHGSQITLRHTHGR--TCWLHSHAAVYPVRYPDKR 486
            ||||.:|:|||||||:||||.||:||||.|..|||:|||...|:  .||||||.|.||:||.:.|
Zfish   265 GPHDQMMSSAFQASLEGGLARITQGQPLDVAFGSQVTLRTVSGKPVPCWLHSHKANYPIRYENGR 329

  Fly   487 GSSHQQQVTCYSFKDVNNWWLVKRPTKENLVVGDEPDIIRHGEIIQLVHGITSRALNSHDVAAAM 551
            |||||||||||.||||||||::|.|.:::|||...|..:|.|:||||:||:|:|.||:|||||.|
Zfish   330 GSSHQQQVTCYPFKDVNNWWIIKDPGRQSLVVSSPPRPVRRGDIIQLLHGMTTRYLNTHDVAAPM 394

  Fly   552 TPQCQEVSCYIDYEIKMAGELLWRVEILNRDSEGDIWHAIKSEVRLVHVSTEASLKFSGRQLPEW 616
            :|..||||.|||:.:.|..:.||||:|:||:||.:||..|.||||||||:|.|.||.||..||||
Zfish   395 SPHSQEVSGYIDFNVSMPAQNLWRVDIVNRESEKEIWKTILSEVRLVHVNTSAVLKLSGASLPEW 459

  Fly   617 GFNQHEVVADR-EKAIHEDAIWNVEEHRYTQTEDHRERERQMLTAEMIPTK---RTRISFWAKLL 677
            ||.|.|||.|: .|...:..:||||||||.::::.:|||.::.:    ||.   ...::|.||.|
Zfish   460 GFKQLEVVGDKIYKGYQQTGMWNVEEHRYGRSQEPKERELELKS----PTHSDVNKNLTFMAKFL 520

  Fly   678 ELQSKMLFQTKSVPNHMYSSMPHEWPLMDKGIAYWLDSQSSAQIYLLGNILLWYTATMGILVYAG 742
            |||.|||........|.|||.|.||..||..|||||...|:|||:.:|||:.|.|..:.::||..
Zfish   521 ELQWKMLTVKNEESEHKYSSSPLEWITMDTNIAYWLHPSSNAQIHFIGNIVTWTTGNITLVVYCL 585

  Fly   743 LLAFYAMRRQRLCFDISEQEWQRFVLAGDTFFMGYVMHYIPYFCVDRTLFLHNYLPAFVFKLLLL 807
            |...|.:||:|...||.:..|::.||||...|.|:.::|:|:|.:::||||::||||..||:|.:
Zfish   586 LFLTYLIRRRRKVEDIPQDSWEQLVLAGVVCFGGWAVNYLPFFLMEKTLFLYHYLPALTFKILQI 650

  Fly   808 CFVVEHLDYLLRRFCTGRGVHLVR------LYRLMLILWLVGVLSIFSKFIPFSYGARKMTLNEV 866
            ..|.||| |          :|::|      .:..:::..|..|...:....|.:||...:|.:::
Zfish   651 PIVTEHL-Y----------IHVLRSSAQQKAFGGVILAVLCSVYMSYHSLSPLTYGQPALTSDKL 704

  Fly   867 RSLRWKDTWDFVLHK 881
            ..|||:::||.:|.|
Zfish   705 AELRWRESWDILLRK 719

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rt	NP_524025.2	PMT	178..421	CDD:396786	88/244 (36%)
		beta-trefoil_MIR_POMT1	453..644	CDD:467752	116/193 (60%)
		PMT_4TMC	674..873	CDD:465056	78/204 (38%)
pomt1	NP_001041532.2	PMT	27..262	CDD:396786	86/236 (36%)
		beta-trefoil_MIR_POMT1	294..488	CDD:467752	116/193 (60%)
		PMT_4TMC	517..711	CDD:465056	78/204 (38%)