Protein Alignment rt and CG11999

DIOPT Version :9

• Sequence 1: NP_524025.2
• Gene: rt / 39297
• FlyBaseID: FBgn0003292
• Length: 886
• Species: Drosophila melanogaster
• Sequence 2: NP_649527.1
• Gene: CG11999 / 40637
• FlyBaseID: FBgn0037312
• Length: 216
• Species: Drosophila melanogaster
• Alignment Length: 232
• Identity: 69/232 - (29%)
• Similarity: 99/232 - (42%)
• Gaps: 48/232 - (20%)

  Fly   426 HDSIMTS-AFQASLDGGLAS----ITKGQPLAVVHGSQITLRHTHGRTCWLHSHAAVYPVRYPDK 485
            |..::|. |...|:..|.|:    :|.|..|.::: |....|        ||||...|
  Fly     3 HILLLTGLALVGSISRGAATESNVVTCGSILKLLN-SDYAFR--------LHSHDVKY------- 51

  Fly   486 RGS-SHQQQVTCYSFK-DVNNWWLVKRPTKENLVVGDEPDIIRHGEIIQLVHGITSRALNSHDVA 548
             || |.||.||....| |||:.|::|..|.| |....||  |..|..::|.|..|.:.|:||..:
  Fly    52 -GSGSGQQSVTGVEQKEDVNSHWVIKAQTGE-LCERGEP--IACGSTVRLEHLSTKKNLHSHHFS 112

  Fly   549 AAMTPQCQEVSCYIDYEIKMAGELLWRVEILNRDSEGDIWHAIKSEVRLVHVSTEASLKFSGRQL 613
            :.::.: ||||.|....:...|: .|.|...|.:     |.. .:.|||.|:.|...|..|||..
  Fly   113 SPLSGE-QEVSAYGTDGLGDTGD-HWEVVCSNEN-----WMR-SAHVRLRHIDTGMYLGMSGRSY 169

  Fly   614 PEWGFNQHEVVADREKAIHEDAIWNVEEH--RYTQTE 648
            ......|.|:|     .:|:      .:|  |:|..|
  Fly   170 GRPISGQMEIV-----GVHK------PQHGTRWTTAE 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rt	NP_524025.2	PMT	178..421	CDD:280519
		PMT1	180..877	CDD:224839	69/232 (30%)
		MIR	452..508	CDD:197746	19/57 (33%)
		MIR	522..578	CDD:197746	17/55 (31%)
		MIR	586..642	CDD:197746	14/55 (25%)
		PMT_4TMC	672..875	CDD:292810
CG11999	NP_649527.1	MIR	26..75	CDD:197746	22/65 (34%)
		MIR	86..138	CDD:197746	17/55 (31%)
		MIR	151..>182	CDD:197746	12/35 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45447170
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1928
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.740