Protein Alignment rt and ogm2

DIOPT Version :10

• Sequence 1: NP_524025.2
• Gene: rt / 39297
• FlyBaseID: FBgn0003292
• Length: 886
• Species: Drosophila melanogaster
• Sequence 2: NP_594135.1
• Gene: ogm2 / 2543657
• PomBaseID: SPAPB1E7.09
• Length: 739
• Species: Schizosaccharomyces pombe
• Alignment Length: 784
• Identity: 231/784 - (29%)
• Similarity: 372/784 - (47%)
• Gaps: 102/784 - (13%)

  Fly   134 RSRSLSCQKQIDKNSAGAASAEERKTANAS-------SQPFTVNLRIDLFSWTLFLLAFGTRFYK 191
            |.|..|...:|:...|.  ..||.|.|..|       ::.:.: |...|....|.::|...|.:|
pombe    14 RQRFPSKHSEIEDEVAN--EKEELKDATKSALGEVKTNKKYYI-LGYFLVPLLLTVIAGFVRVWK 75

  Fly   192 LATPPHIVFDELHYGKYISMYMRNIFFFDQHPPLGKQLIAGLVSLAGYDGNYTFTRIGEPYSPEM 256
            :|....:::||.|:||:.|.|:::.|:||.||||||.|.|....|.||||::.|:. |..|..::
pombe    76 IADSNVVIWDEAHFGKFASYYLKHEFYFDVHPPLGKMLNAVAGKLVGYDGSFDFSS-GATYPEDL 139

  Fly   257 PIFWFRFLPAMCGSLLAPAVYNLLLEAKLSRWSSALGGLLVVLDNSLLTQSRFVLMESMLLLATT 321
            ...:.|...|..|:|..|.||...|....|..::.|..|:|.|||.|.|.|||:|::||||....
pombe   140 NYKFMRLWNAAFGTLCIPLVYFTALNFNYSFLAATLCTLMVALDNHLATISRFILLDSMLLFFII 204

  Fly   322 VGIACLLRFQRSRLGS-----LEW-FFTGTAAAVCLGAAGTVKYVGFLALGLAFYLLCRHLWQLL 380
            ....||.|:.......     .:| |.||    ||:|...:||.||.....:........||.||
pombe   205 STFFCLSRYHVYHKAPFTFYWFKWLFLTG----VCIGCVCSVKLVGLFITAVVGLYTVDELWCLL 265

  Fly   381 YDAGLTDRQLWMHAISRLLIFVGIPLAVYLGVFYIHFKTLHRAGPHDSIMTSAFQASLDGGLASI 445
            .|..:|.:....|.|:|:.:.:.:|:.:|...|:|.|..|:|:||.|:.|.|.|||.|:|  :.:
pombe   266 NDKRVTWKAYAGHWIARVCLLIFLPILIYAFTFWIQFAVLYRSGPGDAQMPSLFQARLEG--SPL 328

  Fly   446 TKGQPLAVVHGSQITLRHTHGRTCWLHSHAAVYPVRYPDKRGSSHQQQVTCYSFKDVNNWWLVKR 510
            || .|:.:::||:.||:..:.....||||...||       ..|.|||||.|..||.||.|:..
pombe   329 TK-NPIDLMYGSKFTLKSRNPTGALLHSHVQTYP-------EGSEQQQVTGYHHKDGNNEWMFV- 384

  Fly   511 PT-------KENLVVGDEPDIIRHGEIIQLVHGITSRALNSHDVAAAMTPQCQEVSCY------- 561
            ||       :||    |..:.|.:|.:::|:|..|:|.|::|.:.|.:..:..|||.|
pombe   385 PTHGVAYNYEEN----DPMNPILNGSVVRLIHPFTNRNLHTHKIPAPLNKRMYEVSGYGLGDVGD 445

  Fly   562 -IDYEIKMAGELLWRVEILNRDSEGDIWH--AIKSEVRLVHVSTEASLKFSGRQLPEWGFNQHEV 623
             .||         |.|.||...:..|.::  ::.:..:|.:......|..|...||.|||.|.|:
pombe   446 EKDY---------WIVNILYDTAHRDAYNVRSLSTVFQLYNPVVGCYLSSSSSSLPSWGFGQIEM 501

  Fly   624 VADRE-KAIHEDAIWNVEEHRYTQTEDHRERERQMLTAEMIPTKRTRISFWAKLLELQSKMLFQT 687
            ..|.: ...:.|..||||||...:..:....:        .|:     |||:..|.|...||...
pombe   502 YCDPDPDPSNTDTQWNVEEHINPRLPEGSIND--------YPS-----SFWSDFLHLNRAMLRAN 553

  Fly   688 KS-VPNH----MYSSMPHEWP--LMDKGIAYWLDSQSSAQIYLLGNILLWYTATMGILVYAGLL- 744
            .. :|:.    ...|..::||  |....:..|.|:|  .:..|:||.:.::.||..::|:|..:
pombe   554 NGLIPDEDKLDALRSEAYQWPFLLATLRMCGWGDNQ--IKYLLVGNPVAYWFATSSLIVFALFVV 616

  Fly   745 -AFYAMRRQRLCFDISEQEWQRFVLAGDTFFMGYVMHYIPYFCVDRTLFLHNYLPAFVFKLLLLC 808
             |..|.||:.|.:  |::....|..||...|:|:..:|:||:.:.|.|::|:|.|::........
pombe   617 GAVLAWRRRVLRW--SQEACDTFHYAGIYPFLGWFFNYLPYYIMGRVLYVHHYEPSYALSTFTAA 679

  Fly   809 FVVEHLDYLLRRFCTGRGVHLVRLYRLMLILWLVGVLS-IFSKFIPFSYGARKMTLNEVRSLRWK 872
            |||   |:..::        :.::.|:::.:.|..::: :|..|...::|... ..::...|||.
pombe   680 FVV---DWFTKK--------MPKIVRVVVFISLYAIIAGVFIYFKDVTFGMHG-PASDFHRLRWL 732

  Fly   873 DTWD 876
            ::|:
pombe   733 NSWN 736

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rt	NP_524025.2	PMT	178..421	CDD:396786	84/248 (34%)
		beta-trefoil_MIR_POMT1	453..644	CDD:467752	65/208 (31%)
		PMT_4TMC	674..873	CDD:465056	50/208 (24%)
ogm2	NP_594135.1	PMT	63..306	CDD:396786	84/247 (34%)
		beta-trefoil_MIR_PMT2-like	332..523	CDD:467755	66/211 (31%)
		PMT_4TMC	540..733	CDD:465056	50/208 (24%)