DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgs3 and Muc12Ea

DIOPT Version :9

Sequence 1:NP_524024.1 Gene:Sgs3 / 39288 FlyBaseID:FBgn0003373 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001368944.1 Gene:Muc12Ea / 32384 FlyBaseID:FBgn0052602 Length:3321 Species:Drosophila melanogaster


Alignment Length:308 Identity:148/308 - (48%)
Similarity:167/308 - (54%) Gaps:55/308 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PTTTTTCAPRTTQPPCTTTTTTTTTTCAPPTQQSTTQPPC------TTSKPTTPKQT--TTQLPC 85
            ||..||..|.|.:|   |..|:...|...||:.:|.:|..      |::||||.|.|  ||..| 
  Fly   651 PTDGTTAKPTTLKP---TEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTDGTTAKP- 711

  Fly    86 TTPTTTKATTTKPTT---TKATTTKATTTKPT--TTKQTTTQLPCTTPTTTKQTT---TQLPCTT 142
            ||...|:.|:.||||   |:.||.|.||.|||  |:.|.||..| |..||.|.||   |:.....
  Fly   712 TTLKLTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAQPTTLKP-TEGTTAKPTTLKPTEGTSAQ 775

  Fly   143 PTTTKP---TTTKPTTTKP---TTTKPTTTKP---TTTKPTTTKP---TTTKPTTTKP---TTTK 192
            |||.||   ||.||||.||   |:.||||.||   ||.||||.||   |:.||||.||   ||.|
  Fly   776 PTTLKPTKGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAK 840

  Fly   193 PTTTKP---TTTKPTTTKP---TTTKPTTTKP---TTTKPTTTKP---TTTKPTTTKP---TTTK 242
            |||.||   ||.||||.||   ||.||||.||   |:.||||.||   ||.||||.||   ||.|
  Fly   841 PTTLKPTEGTTAKPTTLKPTDGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTTAK 905

  Fly   243 PTTTKP---TTTKPTTPKPCGCKSCGPGG-EPCNGCAKRDALCQDLNG 286
            |||.||   ||.||||.||....|..|.. :|.:|...:....:...|
  Fly   906 PTTLKPTDGTTAKPTTLKPTEGTSAKPTTLKPTDGTTAKSTTLKPTEG 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sgs3NP_524024.1 None
Muc12EaNP_001368944.1 PHA03247 <175..670 CDD:223021 9/21 (43%)
PHA03247 <659..1197 CDD:223021 144/300 (48%)
PHA03247 <1049..1651 CDD:223021
PHA03247 <1723..2186 CDD:223021
PHA03247 <2110..2706 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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