DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-2 and atpE

DIOPT Version :10

Sequence 1:NP_729707.1 Gene:Vha16-2 / 39282 FlyBaseID:FBgn0028668 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_418193.1 Gene:atpE / 948253 ECOCYCID:EG10102 Length:79 Species:Escherichia coli


Alignment Length:60 Identity:18/60 - (30%)
Similarity:31/60 - (51%) Gaps:5/60 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 VHLGAGLSVGLPGLTAGVAIGIAGDAGVRGTAEQPRLFVGMVLILIFAEVLALYGLIVAI 152
            :::.|.:.:||..:.|.:.|||.|...:.|.|.||.|     :.|:..:...:.||:.||
E. coli     9 LYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDL-----IPLLRTQFFIVMGLVDAI 63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-2NP_729707.1 PRK13469 15..120 CDD:469780 8/26 (31%)
ATP-synt_Vo_c_ATP6C_rpt2 91..155 CDD:349416 18/60 (30%)
atpENP_418193.1 PRK06876 2..79 CDD:180739 18/60 (30%)

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