Protein Alignment Vha16-2 and VMA3

DIOPT Version :9

• Sequence 1: NP_729707.1
• Gene: Vha16-2 / 39282
• FlyBaseID: FBgn0028668
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_010887.3
• Gene: VMA3 / 856686
• SGDID: S000000753
• Length: 160
• Species: Saccharomyces cerevisiae
• Alignment Length: 148
• Identity: 98/148 - (66%)
• Similarity: 116/148 - (78%)
• Gaps: 0/148 - (0%)

  Fly    10 PSYAFFLGCTGAAVAIIFTTLGASYGTAVSGVGIAKMAVNRPDMIMKAIIPVVMAGIIAIYGLVV 74
            |.||.|.|..|.|.|||||:|||:||||.|||||....|.|||::.|.|:||:||||||||||||
Yeast     6 PVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVV 70

  Fly    75 SVLIAGSIGDDYTMEDSYVHLGAGLSVGLPGLTAGVAIGIAGDAGVRGTAEQPRLFVGMVLILIF 139
            |||:..|:|....:...::.|||||||||.||.||.||||.|||||||:::||||||||:|||||
Yeast    71 SVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIF 135

  Fly   140 AEVLALYGLIVAIYLYTK 157
            ||||.|||||||:.|.::
Yeast   136 AEVLGLYGLIVALLLNSR 153

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-2	NP_729707.1	PRK06558	14..158	CDD:235830	95/144 (66%)
		ATP-synt_C	15..120	CDD:294318	66/104 (63%)
		ATP-synt_C	94..154	CDD:278563	48/59 (81%)
VMA3	NP_010887.3	V_ATP_synt_C	11..116	CDD:130170	66/104 (63%)
		ATP-synt_Vo_c_ATP6C_rpt2	84..151	CDD:349416	48/66 (73%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157342243
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0636
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S170
OMA	1	1.010	-	-		QHG53914
OrthoFinder	1	1.000	-	-		FOG0001101
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10263
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X666
TreeFam	1	0.960	-	-
	10	9.760